Drosophila arizonae: 108620931
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Entry
108620931 CDS
T05886
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
daz
Drosophila arizonae
Pathway
daz03030
DNA replication
daz03410
Base excision repair
daz03420
Nucleotide excision repair
daz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108620931
03410 Base excision repair
108620931
03420 Nucleotide excision repair
108620931
03430 Mismatch repair
108620931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daz03032
]
108620931
03400 DNA repair and recombination proteins [BR:
daz03400
]
108620931
DNA replication proteins [BR:
daz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108620931
DNA repair and recombination proteins [BR:
daz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108620931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
AAA_30
AAA_14
RuvB_N
Rad17
nSTAND3
AAA_5
AAA_33
AAA_18
RCF1-5-like_lid
AAA_16
BRCT_2
AAA_17
PTCB-BRCT
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
108620931
NCBI-ProteinID:
XP_017873460
LinkDB
All DBs
Position
2
AA seq
1102 aa
AA seq
DB search
MRCGIAVEPGVAPMGKQRARQTRRPGNYVWFFGGTCGPTPGTNRLSYSNSYSSSYSYGYS
YGILTRPKALGIDSFFKRVPSKKTSDEDATSPPTPAPRKRKALAISSDEDEVPASPQISK
HGKELKKSRRIHDAPDNGHATKKPSLSKLKEPPKQLKKVDPTELFGGETTRIEAPKPKER
SLIELEDEDIDRSLMEVDVDDLIPSPAASRKRSKASSPTKTPKVEAKTPKVEAKTPKVEA
KTPKSEAKTPKSEAKTPKAETKTPKAEAKTTKAKTPKQEKHVDLESSVLSDEERHERKRM
AAVLYQKYKNRSSCLNPGSKEIPKGSPDCLKGLTFLVTGILESMERDEAASVIKGFGGRV
MTVVGKKLNYLVVGEEAGPKKLAQAEEFHITILSEDGLFDLIREKSGETVKSKSSEVKQE
KNSSPKMKNEHEKSNPKVIKEHKEKISPEIKREHEEKSSYKIKRELEEKSSSVKAKQEHE
HKSSSKIKKDPDELKYSNGFKQESSSNGLKMKTEQSSSSQIKREPNNNVADVKEEDVSMN
IALVDKYKPTSIKDIVGQAGANSNVTKLMNWLSKWYVNHDGKKKLQRPNPWAKNDDGSFY
KAALLSGPPGIGKTTTATLVTKELGFDAVEFNASDTRSKRLLKEEVSSLLGNKSLAGYAN
GKTQAVSKKHVLIMDEVDGMAGNEDRGGMQELIALIKDSSVPIICMCNDRNHPKIRSLVN
YCYDLRFQRPRIEQIKGRIMSICFKEKIKMSPGKLEEIIGATNNDIRQTINHIALLSAGE
QMPGNPSAAQQVATKDLKLGPWEVVRKVFSAEEHKHMSIFDKCDLFFHDYSMAPLFVQQN
YLQVTPQGNRNEILSKVAATADALSLGDMVDKRIRSNSAWSLLPTQAVFSSLLPGEYMCG
NFTGQINFPGWLGKNSRSNKRSRLAQELHDHTRICTSGSRQSVRLEYAPHLLANIVRPLA
EDGQEGVAAALQVMKDYHLLREDLESLIELSSWPGKKSPMDAVDGRVKAALTRAYNKEVM
PYSYSAQATVKKKRAEAAGDEEEAGMLYGEDEEGGQVVHSSEDEDDDKLELDALIKAKKK
PAPAAKKASGSGAAKPKAKAKK
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcggcatcgcagttgaacccggggttgcgccaatgggcaagcagcgagccagg
caaaccaggcggccaggcaactacgtctggttttttgggggcacatgtggcccaacacca
ggaacaaacaggctcagctacagcaacagctacagctccagctacagctacggctatagc
tatggcattctcacacgacccaaagctctgggtatagactcgttcttcaagcgagtgccc
agcaagaaaaccagcgatgaagatgcgacctcgccgccaacgccggcacctcgaaagcgg
aaagctctggccatatccagcgatgaggacgaggtgcccgccagtccgcagataagcaag
catggaaaggagctgaagaaatcacggcgtatacatgatgcccctgacaatggacacgcc
accaagaagccttcgttgtccaagctgaaggagccgcctaagcagctgaagaaggtggat
ccgacggagttgtttggcggcgaaactacacgcatagaggcgcccaagccgaaggagcgt
agtcttatcgaattagaagatgaggacattgatcgcagtctcatggaagtagatgtggat
gatctaattcccagtccagcggctagccgaaaaagaagcaaggccagcagcccaaccaag
actcccaaggttgaggccaagacgcccaaggttgaggccaagacgcccaaggttgaggcc
aagacgcccaagtcagaggccaagacacccaagtcagaggccaagacacccaaggcggag
acaaagactcccaaagcagaagccaagactaccaaggccaaaacgcctaaacaggaaaag
catgtggatctggagagcagcgtgctgtccgatgaggagcggcacgagcgcaaacgcatg
gccgctgtactctatcagaagtacaagaatcggagcagttgcctaaatccgggcagcaaa
gagatacccaaaggatcgcccgattgcttgaagggattaacattcctggtcactggcata
ttggagtccatggaacgtgatgaagccgcctcggttattaagggatttggtgggcgtgtc
atgacagtagtgggcaaaaaactcaactacttggtggtgggcgaggaggcaggacccaaa
aaactagcccaagctgaggagttccatataaccatactcagcgaggatggactctttgat
ttgataagggaaaagtctggcgaaactgtaaaatcgaagagttccgaagtaaaacaggag
aagaacagcagcccgaagatgaagaatgagcatgagaagagcaacccaaaggttataaag
gagcataaagagaagataagtccggaaatcaaacgagagcacgaggaaaaaagcagctat
aaaattaaaagagaattggaggagaagagcagcagcgttaaagcgaagcaggagcatgaa
cataagagcagctccaagattaaaaaggatccagacgagttgaagtatagcaacggcttc
aagcaggagtcaagcagcaatgggctcaagatgaagaccgagcaaagttccagttcacag
attaaaagagaacccaacaacaatgtggctgacgttaaggaggaggatgtcagcatgaat
atagccttggtggacaaatacaagcccacttcaatcaaggacattgtgggccaggcagga
gcgaacagcaatgtaaccaaattgatgaactggctgtccaagtggtatgtgaatcacgat
ggcaagaagaaactacagcgacccaatccgtgggccaaaaatgatgatggcagcttttac
aaggcagccctgctctccggtccgccgggcataggcaagacaacaactgcgacgctcgtg
accaaggagctgggcttcgatgcagtggagttcaatgcctcggatacgcgcagcaagcgc
ctgctcaaggaggaggtatccagcctgctgggcaacaagtcgcttgctggctatgccaat
ggcaagacgcaggcggtgtccaagaagcatgtgctcatcatggacgaggttgatggcatg
gcgggcaatgaggatcgcggcggcatgcaggagctgattgccctgatcaaggacagctct
gtgcccatcatatgcatgtgcaacgatcgcaatcatcccaagatacgttcgctggtcaac
tattgctacgatttgcgtttccagcgaccgcgcatcgagcagatcaaggggcgcatcatg
agcatatgcttcaaggagaaaattaaaatgtcgccgggcaagctggaggagattataggc
gccactaacaatgacatccggcagaccatcaatcacattgcgctgcttagcgctggtgag
cagatgccgggcaatccctcagccgctcaacaagtagccaccaaggatttgaagctggga
ccttgggaggtggtgcgcaaggtcttctctgccgaggagcacaagcacatgagcatcttc
gacaaatgcgatttgttcttccacgactacagcatggcgccgctgtttgtgcagcagaat
tatcttcaggtaacgccacagggcaatcgtaatgagattctctccaaggtggcggcgact
gcagatgcactcagccttggcgacatggtggataaacgcattcgctccaattccgcctgg
agtctgctgcccacgcaggccgtcttcagctccctgctgcctggcgaatatatgtgcggt
aattttacgggtcagatcaactttccyggctggctgggcaagaattcgcgcagcaacaaa
cggtcgcgtctcgcccaggagctgcacgatcatacgcgcatctgcacatcgggctccagg
cagtccgtacgtctggaatatgcgccgcatttgctggccaatattgtgcgcccgttagct
gaggatgggcaggaaggcgtggctgctgcgctgcaggtcatgaaggattatcatttgctg
cgcgaggacctggaatcgttgatcgaactgtccagctggccgggcaaaaagtctccgatg
gatgctgtggatggacgggtcaaagcggcgcttacacgtgcctacaacaaggaggtaatg
ccttattcctactctgcgcaggccaccgtcaaaaagaagcgcgccgaagcagcaggtgat
gaggaggaagcgggtatgctgtatggcgaggatgaagaggggggccaagttgtgcactcc
agtgaagatgaagacgacgacaagcttgaattggatgcattgatcaaggccaaaaagaag
ccggcaccagcagctaaaaaggcaagtggatcaggtgcagccaaacccaaagccaaggcc
aagaaataa
DBGET
integrated database retrieval system
