KEGG   Drosophila arizonae: 108620941
Entry
108620941         CDS       T05886                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
daz  Drosophila arizonae
Pathway
daz03013  Nucleocytoplasmic transport
daz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:daz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108620941
  09122 Translation
   03013 Nucleocytoplasmic transport
    108620941
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:daz03019]
    108620941
   03041 Spliceosome [BR:daz03041]
    108620941
Messenger RNA biogenesis [BR:daz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     108620941
Spliceosome [BR:daz03041]
 Complex C
  Other components
   EJC/TREX
    108620941
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108620941
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WDR55 EIF3I Beta-prop_Aladin ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_NOL10_N Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N eIF2A Beta-prop_EML Beta-prop_HPS5 Beta-prop_Vps41 Tricorn_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st DSE1_N RMC1_N Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_EIPR1 NBCH_WD40 Beta-prop_SPT8 TRM82_WD Beta-prop_ELP1_1st B-prop_COPA_B_2nd PD40 Beta-prop_DCAF12 WD_LRWD1 PAC11 Beta-prop_Nup120_160 DPPIV_N Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 108620941
NCBI-ProteinID: XP_017873478
UniProt: A0ABM1Q1Z2
LinkDB
Position
2
AA seq 322 aa
MSRSEQTFEDLKSYFRSHSKIREQRPHMSKVHSVCWNANGCHLASGSFDKTVAVYTLERD
RFVKNNVFRGHTASVDQLCWHKTNPDQFSTASGDKTVRIWDIRVGKCVSVTNTKGENINI
AWSPDGKTIAVGNKEDLITFIDTRTNKIRVEEPFSFEVNEISWNNTNDLFFLTNGMGCMH
VLSYPSLEHYMTLKAHPANCICIEFGPTGKYFATGSADAQVSLWDANELACLRMISRLEW
PVRTISFSHDERLIASASEDLLIDIAYTETGERVTDIHVDASTFTVAWHPKQYLLAYACD
EKETIGDRRRDVGNVKIFGFPE
NT seq 969 nt   +upstreamnt  +downstreamnt
atgagtcgcagcgagcagacatttgaggatctgaaatcctactttcgatctcacagcaaa
atacgcgagcagcggccgcatatgtcaaaggtgcattcggtttgctggaatgcaaatggc
tgccacttggcatcgggctcctttgataagactgtggctgtctacaccctggagcgggat
cgctttgtgaagaacaatgtgttccgcggccacacagcctccgtggaccagttgtgctgg
cacaaaacgaatccggaccagttcagcacggcgagcggcgataagactgtgcgaatctgg
gacattcgagtgggcaaatgtgtctcagtcaccaacacaaagggcgagaacatcaacatc
gcctggtcgcccgatggcaagacgattgccgtgggcaacaaggaggacctgatcaccttc
atcgacacgcgcaccaacaagatccgcgtggaggagcccttcagctttgaggtgaacgag
atctcgtggaacaatacgaacgacttgttcttcctgaccaacggcatgggctgcatgcac
gtgctcagctatcccagtctggagcactacatgacgctgaaggcgcatcccgccaattgc
atatgcattgagttcggacccactggcaaatactttgccacgggctcagcggacgcgcag
gtctccctgtgggacgccaacgagctggcctgcctgcgcatgatcagccgactggagtgg
ccagtgcgcaccatatccttcagccatgacgagcggctgatcgcctcggccagcgaggat
ctgctcatcgacattgcgtacacggagacgggcgagcgagtcacggatatccatgtggac
gcctccactttcactgtcgcgtggcatcccaagcagtatctgctggcctatgcctgcgac
gaaaaggaaaccatcggcgatcggcggcgcgatgttggcaatgtcaagatattcggattc
ccggaataa

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