Drosophila arizonae: 108621047
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Entry
108621047 CDS
T05886
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
daz
Drosophila arizonae
Pathway
daz03013
Nucleocytoplasmic transport
daz03015
mRNA surveillance pathway
daz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108621047
09122 Translation
03013 Nucleocytoplasmic transport
108621047
03015 mRNA surveillance pathway
108621047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108621047
03041 Spliceosome [BR:
daz03041
]
108621047
03009 Ribosome biogenesis [BR:
daz03009
]
108621047
03012 Translation factors [BR:
daz03012
]
108621047
Enzymes [BR:
daz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108621047
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108621047
mRNA cycle factors
Stress granule specific factors
108621047
Spliceosome [BR:
daz03041
]
Complex C
Other components
EJC/TREX
108621047
Ribosome biogenesis [BR:
daz03009
]
Eukaryotic type
90S particles
Helicases
108621047
Translation factors [BR:
daz03012
]
Eukaryotic type
Initiation factors
eIF-4
108621047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
TniB
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
108621047
NCBI-ProteinID:
XP_017873635
LinkDB
All DBs
Position
2
AA seq
399 aa
AA seq
DB search
MARKNAQAEDLSNVEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSIKPI
VKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILALGDM
MNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEM
LNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIK
QFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMP
QKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG
RKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaaaaatgcacaggccgaggatctctcaaatgtggagtttgagacaagcgaa
gatgtggaggtaatacccaccttcaatgccatgaacctaaaggaggagctgctacgcggc
atttatgcgtacggctttgaaaaaccatctgctatacaacagcgcagcataaagccaatt
gtgaaaggacgcgacgttatcgcgcaagcacagtccggtacaggcaagacagcgacattt
tccatttccattttacaaagcctggacacaacgctgcgtgaaacacaggtcctgtgtctg
tcccccacacgcgagttggctgtccaaatccagaaggttattctagccctgggcgacatg
atgaacgttcagtgccatgtctgcattggcggcacaaacctgggcgaggacatacgaaag
ttggattacggccagcatatagtaagtggcacacctggtcgtgtcttcgacatgatcaag
cgacgtgtcctccgtacaagagccatcaagatgctggtgctcgacgaggcagacgagatg
ttgaataagggcttcaaggaacagatctatgatgtctatcggtatttgccgccagctact
caagttgtgctcatttccgctacattgccccatgaaattctggaaatgacctccaaattc
atgactgatcccattcgaattttggtcaaacgcgatgaattgacgctggagggcattaaa
cagttttttgttgccgtggagcgagaggaatggaagtttgacaccttatgcgatctctat
gacacattgaccatcacccaggcggtcattttctgcaatactaagcgcaaggtggactgg
ttgacggagaaaatgcgcgaggccaacttcacggtcagctcaatgcatggcgacatgcca
caaaaggagcgcgacgagatcatgaaggagttccgtgccggccagtcccgcgtcctcatc
accaccgatgtgtgggcgcgtggcatagacgtgcagcaggtgtccttggtcatcaattac
gacttgcccaacaatcgtgagctgtacattcaccgcatcggtcgatcgggccgctttgga
cgcaagggcgttgccattaactttgtgaaatcggatgatatacgcattttgcgtgacatt
gagcaatattactcgacgcaaatcgacgagatgcccatgaatgtggctgatttaatctaa
DBGET
integrated database retrieval system
