Drosophila arizonae: 108621407
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Entry
108621407 CDS
T05886
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
daz
Drosophila arizonae
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
daz03009
]
108621407
Enzymes [BR:
daz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108621407
Ribosome biogenesis [BR:
daz03009
]
Eukaryotic type
Pre-60S particles
Helicases
108621407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
108621407
NCBI-ProteinID:
XP_017874191
LinkDB
All DBs
Position
2
AA seq
610 aa
AA seq
DB search
MSRKTWKSLDKPPLSQPVLEVLQGFGFDLMTPVQTASIPLLLARKDVSAEAVTGSGKTLA
FLVPMLEILQRRHNETPWTAKEIGALIISPTRELARQISEVLAQFLAHEQLEHLNQQLIV
GGNSIEEDIAALKQQSPCILVCTPGRLEDLFQRKGDDLNLASRVKSLEFLVLDEADRLLD
LGFKTSVNNILGYLPRQRRTGLFSATQTTEVTDLIRAGLRNPVLVSVKEKASVNTPARLQ
NFYRIVEPEQKFLSLLQFLRSPTSKTGKVMVFFPTCACVEYWAEMLPSFLPDRQVLGIHG
KMKNKRANVVERFRTEANSVLLCTDVLARGLDVPEIEWVVQWDPPSNASSFVHRVGRTAR
QGNEGNALVFLLPTEDAYIQFLKLNQKVDLSELQEECIETDEAELRSTVEKLHQLQAADK
GAYDKGMRAFVSHVRAYTKHECSAILRLKDLDLGKMATAYGLLQLPRMPELKNYQGNGYI
APSFEVDLTKLTYKNAQKEQVRKQKLQTFEQTGTWPGRQKQHMKRTESWDQTKKAKLDAK
SKKELRKAKKQRKREAAAAEGGAQRKRKQQYTQEDLEELASDIRLYKRLKKKKITDEDYD
KAMGIDGVDD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcaaaacatggaaatccttggacaagccgccgctttcacagcccgtcctcgag
gtgctgcaggggtttggctttgatctaatgacacctgtgcaaacggcatcgattccattg
ctgttggcacgcaaggatgtctccgccgaagctgttacgggcagtggcaaaacgctggcg
ttcctcgtgcctatgctagagattctgcagcgtcgccacaatgagacgccctggacagca
aaggagattggtgcactgatcatatcgcccacacgtgagttggcgcgacagatatccgag
gtgcttgcccagttcctggcacacgaacaactggagcacctgaatcaacagctcatcgtc
ggcggcaatagcattgaggaggacatcgccgctctgaagcagcaatcaccatgtatactg
gtgtgcacgcctggacgtctagaggatctgtttcagcgcaaaggcgacgacctcaatttg
gcttcgcgtgtgaagagcttggaattcctggtcctcgacgaggcggatcgcctgctcgac
ttgggctttaagacgagtgtcaacaacatcttaggctatctgcctcgccagcgacgcact
ggtctcttctcagccacacagaccaccgaggtaactgacctgatacgtgccggccttcgc
aatcctgtgctggtctccgtcaaggagaaggcttccgttaataccccagcgcgtctacag
aatttttacaggattgtggagccggaacaaaagtttctctcgctgctgcagttcctacgc
tcgcccacctccaagaccggcaaagttatggtcttctttcccacctgcgcttgcgtcgag
tactgggcagagatgctgccgtcgtttctgcccgatcgccaggtcctgggcatccacggc
aagatgaagaacaagcgggccaatgtagtggagcgtttccgcaccgaggcaaactcggtg
ttgctgtgcacggatgttttggcgcgtggtctggatgtgcccgaaatcgagtgggtggtg
caatgggatcctccgtccaatgcttcgagtttcgtgcatcgtgtgggacgcaccgctcgg
caaggcaacgagggaaacgctttggtattcctgctgccaaccgaggatgcatatatccag
ttcctaaagctcaatcagaaagttgacttgagcgaactgcaagaagaatgcattgaaaca
gacgaggctgagctgaggtcaacggtggagaaactgcatcagctgcaggccgctgataaa
ggtgcctacgacaaaggcatgcgagcctttgtatcccatgtgcgagcctacaccaagcac
gagtgcagcgctatattgcggctgaaggatctggatctgggcaaaatggcaacggcgtat
ggactgctgcagctgccgcgcatgccagagctgaagaactaccagggcaatggatacatt
gcgcccagcttcgaagtggatctcaccaagctgacctacaagaatgcgcagaaggagcag
gtgcgcaagcagaagctgcagacgttcgagcagacgggcacttggccaggacgccagaag
caacacatgaaacgaaccgaatcctgggatcagacaaaaaaggccaagctggatgccaag
tcgaagaaggagttgagaaaggcgaagaagcagcgcaagcgcgaagcggcagcagccgag
ggtggggcgcagcgcaaacgcaagcagcaatacacacaggaggacctggaagaactggcc
agcgatattcgtctatataagcggctcaaaaagaagaaaatcaccgacgaggactatgac
aaggccatgggcattgatggtgttgacgactag
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