Drosophila arizonae: 108621589
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Entry
108621589 CDS
T05886
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
daz
Drosophila arizonae
Pathway
daz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108621589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108621589
Enzymes [BR:
daz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
108621589
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108621589
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108621589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
108621589
NCBI-ProteinID:
XP_017874492
UniProt:
A0ABM1Q4V6
LinkDB
All DBs
Position
2
AA seq
554 aa
AA seq
DB search
MKGTGNYYKMSRNKDKYDSTNRRQQIFLSAEDIAAGKKTNWTGLEITGCVRNISPTLWEF
EHLTALYLNDNQLLRLPADVGMLVNLRTLDLSSNKLRSLPAELGELIQLRELLLNNNFLR
VLPYEIGKLFHLVILGLMGNPLQKEFMNIYNEPNGTTKLLNHMLDNLSFTVNPPPQRPWL
PLAKPNKSRPACIFTVMCYNVLCEKYATRQMYGYCPSWALDWQYRKKSIIDEIRHYAADI
ISLQEIETEQFYHFFLPELKNDGYEGIFSPKSRAKTMSEIERKYVDGCAIFFRTSKFTLI
KEHLIEFNQLAMANAEGSDNMLNRVMPKDNIGLAALLKVKETAWEPMSEVTQISQPLLVC
TAHIHWDPEFCDVKLIQTMMLSNELKTIIDEASHSFRPGHKNDSNSVQLLLCGDFNSLPD
SGVVEFLGKGRVAMDHLDFKDMGYKLCLQRLLSNDTNEFTHSFKLASAYSEDIMPHTNYT
FDFKGIIDYIFYTKTGMVPLGLLGPVSTDWLRENKVVGCPHPHIPSDHFPLLVELELMHT
ASQQAPPNGLINRR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaacagggaattactataaaatgtctcgtaacaaagacaaatatgacagcacg
aatagacggcagcagatatttctgtctgccgaggatattgccgctgggaagaagacaaat
tggactgggctcgaaataacgggctgcgtgcgaaatatcagtcccactttgtgggagttt
gagcatctgacagccctctatctgaatgacaaccagctgcttcgactgccagcggatgtg
ggcatgttggttaatctgcgaacacttgacttgtccagcaacaagttacgcagtctgccc
gctgagctgggcgagctcatacagctgagagagctgttattgaacaataactttttgcgt
gtgctgccatatgaaattggcaagctgtttcatctggtcatcctcggtctgatgggcaat
ccgctgcaaaaggagttcatgaatatctataatgagccaaatggaacgacaaaattgttg
aatcacatgctggacaatttatcatttaccgtcaatccaccgccccagaggccatggctg
ccgctcgctaagcccaacaaatcgcgaccagcctgcatatttacggttatgtgttacaat
gtgctatgcgagaaatatgcgacgcggcaaatgtacggatattgtccatcgtgggcactg
gactggcagtatcggaagaaatctattatcgacgagataaggcattatgcggcggacatt
attagcttgcaggagatcgagactgaacagttctatcactttttcctgcccgagctgaag
aacgatggatacgagggtatcttctcgcccaagtcgcgtgccaagacaatgtcggaaatt
gaaagaaaatacgttgacggatgtgcgatatttttccgaacatcaaaatttacgttgatc
aaggagcacctaattgaattcaatcagctggccatggccaatgcggagggctcggacaac
atgctaaatcgtgtgatgcccaaagacaacattggtctggccgccttgcttaaagtgaag
gagaccgcctgggagccaatgtccgaggtaacgcagatctcacagccgctgctcgtgtgc
accgcccacatacattgggatcccgaattctgtgacgtcaagctcatacagaccatgatg
ctgagcaatgaactgaagacgatcattgacgaagccagccacagtttccggcctggccac
aaaaacgactcaaacagtgttcagctgctgctctgcggcgatttcaattcgctgccggac
tcgggtgtggtggagtttttgggcaaggggcgtgttgcaatggatcatttagatttcaaa
gacatgggctacaagctatgcctgcaacggttactctcaaacgataccaatgagtttacg
cattcctttaagcttgcctccgcctatagcgaggacatcatgccgcataccaactatacg
ttcgattttaagggcatcattgattatattttctacacaaagaccggaatggtgccgttg
ggcctgctgggacctgtttctactgactggctgcgcgaaaacaaagtggtcggttgtccg
catccgcatattccctccgatcactttccacttctagttgaactggagctaatgcacact
gccagccagcaggcgccaccaaatgggctgatcaatcgacggtag
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