Drosophila arizonae: 108621793
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Entry
108621793 CDS
T05886
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
daz
Drosophila arizonae
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
daz03041
]
108621793
Enzymes [BR:
daz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108621793
Spliceosome [BR:
daz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108621793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
KH_2
CMS1
KH-I_KHDC4-BBP
KH_KhpA-B
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108621793
NCBI-ProteinID:
XP_017874806
LinkDB
All DBs
Position
2
AA seq
701 aa
AA seq
DB search
MSELDWDDPNYVEKPTEYAQSYNKNDDDHYSRGRRSGYGGSSKKRDREQRESYDRDNGNS
RRNAEHAYSKSLKISSDMVGRVIGRGGSNITRIQQDFSVRVDVDKGRRMVTVSGSEKGNV
RNALDEISRQMQSDGGGYNQTSEGGSHGRSYGQSDYGRSSGREPGRYEDRSSGRSNDRRE
RSSYNSYGGGQSIYDLAPSSGKADDGDLTGTIDWAALNKASEAAQAERWAKCPPLTKNFY
KECPEVANLSEAEVAQLRLENNNISVSHVFEPKEGEVFAPIPNPVWKFEQCFAEYPDLLA
EIKKQGFTKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEYQSTPRGTRG
GANVLVLAPTRELALQIEMEVKKYSFRNMKAVCVYGGGSRKMQISDVERGAEIIICTPGR
LNDLVQAGVINISSITYLVLDEADRMLDMGFEPQIRKVLLDIRPDRQTIMTSATWPPGVR
RLAQSYMKNPIQVCVGSLDLAATHSVKQVIELLQDDKDKFHVLRKFVENMTKSDKIIVFC
GRKARADDLSSDLSLNGYSTQCIHGNREQCDREQAIADIKSGLVRILIATDVASRGLDIE
DISHVINYDFPRNIEEYVHRVGRTGRAGRRGTSISFVTREDWAMAKELIDILEEAQQDVP
EELRRMSTRFSDMKQRRAAEGGIGGGRSFGGGRSGGHRTRY
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaattagattgggatgacccaaactatgttgagaaaccaacagaatacgctcaa
tcatacaataagaatgatgatgatcattactctcgtggccgtcgctcgggctatggcggc
agcagtaaaaaacgcgacagagagcagcgtgagagctatgacagagataacggcaactct
cggaggaacgcggagcacgcttacagcaaatcactgaaaatatcttcagatatggtgggc
cgtgtaatcggtcgcggtggctccaacataacgcgaatccaacaagatttctcagttcgg
gtcgatgtcgataagggccgacgtatggtcacagtctcaggcagtgagaaaggtaacgtt
agaaatgcgttagacgagataagcaggcagatgcaaagcgatggcggtggctataaccag
acgtcggagggtggcagtcatggccgatcctatggtcagtccgactatggtcgctccagt
ggccgggagcctggacgatatgaggatagaagctctggtcgctcgaacgacagaagagaa
cgatcgagctataatagttatggcggaggacaaagcatttatgacttggcaccatcctca
ggaaaggcagacgatggcgacttgacgggcaccatagactgggcggcactgaacaaggcc
tcagaagctgctcaggccgaacgttgggcgaaatgtccaccgttgaccaaaaatttctac
aaggaatgtcccgaggtggctaacctgtccgaggcggaggtagcacagctgcgcctggag
aacaacaacatcagcgtttcgcatgtcttcgaaccgaaggagggcgaagtgtttgcgccc
ataccgaatcctgtatggaagttcgaacaatgctttgccgagtatcccgatttgctggcc
gaaataaagaagcagggatttacgaagccttcgcccatacagtcgcaggcctggcccatt
ctgctccagggtcacgacatgattggcattgcccaaacaggcacaggaaagacgctcgcc
tttctgctgcctggcatgatccacaccgaataccagagtacgccgcgtggtacacggggt
ggtgcgaatgtcctggtcttggcgcccacgcgagaacttgccctccagatcgagatggag
gtgaagaagtattcttttcgcaacatgaaagccgtttgcgtgtatggcggcggcagtcgc
aagatgcaaatttcggatgtggaacgtggcgctgagataatcatctgcacgcctggacgt
ttgaatgatctggtgcaggccggcgtaatcaatatatcgtccattacgtatctggtgctg
gacgaagccgatcgcatgctggacatgggctttgagccgcagatacgcaaggtgctgctg
gacatacggccggataggcaaaccatcatgacgtcggccacctggccgccgggtgttcgt
cgcctggcgcaaagttatatgaaaaatccgatacaggtgtgcgtcggctctctggatctg
gctgctacgcattccgtcaaacaggtgattgagttgctgcaggatgacaaggataagttc
catgtgcttcgcaagttcgtggagaacatgaccaagtcggacaagatcattgtgttctgt
gggcgaaaggcacgtgccgacgatctgtctagcgatttgagtctgaatggatattccacc
cagtgcatacacggaaatcgggagcagtgcgatcgagagcaggccatagcggatattaag
tcgggcttggtgcgcattctaattgccactgatgtcgcctcacgcggcctggacattgag
gacatatcgcatgtcatcaactatgactttccacgcaacatagaggagtatgtgcatcgt
gtcggtcgcacgggcagagccggtcgtcggggtacatccattagcttcgtcacacgtgag
gactgggccatggccaaagagctgattgatatactggaggaggcccagcaggatgtgcct
gaggagctgcgtcgcatgtccacgcgattttcagatatgaaacaacgtcgagcagccgaa
ggtggcattggaggtggacgtagttttggcggtggccggtctggcggtcatcgaactcgt
tattaa
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