Drosophila arizonae: 108621845
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Entry
108621845 CDS
T05886
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
daz
Drosophila arizonae
Pathway
daz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108621845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108621845
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108621845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
eIF2A
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
Tricorn_2nd
PEP5_VPS11_N
Beta-prop_WDR11_2nd
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_ACSF4
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
108621845
NCBI-ProteinID:
XP_017874897
UniProt:
A0ABM1Q611
LinkDB
All DBs
Position
2
AA seq
806 aa
AA seq
DB search
MDVSQPPPQLLTAPSALATNFTSMPPPSMGGQHYRHYHPHHGSGKQGYNHFKPFMPGGFQ
RPFGMSQDDFDGKRLRKSVMRKTVDYNASIIKALEARLWQRDYRDRLALQPDSIYVPQML
PPSSSLDNPANAITTRFVKTATNKMRCPIFTLAWTPEGRRLVTGASSGEFTLWNGLTFNF
ETILQAHDIAVRTMVWSHNDSWMVTGDHGGYVKYWQSNMNNVKMYQAHKEAIRGISFSPT
DSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQKAMIVSGSKDNQQPIKIW
DPKSGLALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKE
ASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSG
SNDHTIKFWTRNRPGDLMRDKYNLNTLPASLAALDECEYDDAVIPGMGPEDKVEFTESLT
ADKGFIPGLDLDAGGRLTNDRDREKKVPYSKPIPRNFQVQWAGPRRADDPSVLSIHDELA
ARESKDSSNGLTHQQISENTLEGILASGMLNGLDPQTIVGIFVYGRFIRVHPDSRLMGAI
RQGAEYLNKYIDAGKLEELRDVVPMRERERERSRSLSPAVEGAQVRGEVSPPLKKSRFEP
RQHNAQLVCVRELLLLKKPFLPSLLTVKAQQPKTEFIDEPTSYGSGSPLDQMVREDSNRP
SPWAATNPWTYGNGNGSGNGGPANQNGYGHSGGDNFNDRDRDQFQKSSNNNGQQRRRRGN
NGSSGGGGGAGGGGGRNRARNNSRRF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcacagccgccgccacaactgttgacggccccatcggcattggcaacgaat
tttacttcgatgccgccgccatcaatgggtggtcagcactacagacattatcacccacat
catggatcgggcaagcaggggtataaccactttaaaccctttatgcctggaggatttcaa
cgtccctttggtatgtcacaggatgactttgatggcaagcgactccgcaagagtgtcatg
cgtaaaacggtggactacaatgcgtctataatcaaggcgctggaggcacgtctctggcaa
cgtgattatagagatcgattggcacttcagccggacagcatttatgtgcctcaaatgctg
ccgcccagcagctcgctagacaatccagcaaatgcgataacaactcgttttgtgaaaaca
gccacaaataaaatgcgctgtcccatattcacgcttgcgtggacacctgagggcaggcga
ttagtcacgggcgctagctctggagagtttacgctttggaatggcctgacatttaacttc
gagaccatactgcaggcacacgatattgcagtgcgtacgatggtttggtcgcacaatgac
agctggatggtaacgggcgatcatggcggctatgttaagtactggcaatcgaacatgaac
aacgttaagatgtatcaggcgcacaaggaggcgattaggggaataagttttagtcccacg
gacagcaaatttgtcagcggcagtgacgatggaacgctgcgcatttgggactttatgcgt
tgccaggaagagcgcgttctacgcggtcatggcgcagatgtcaaatgcgtgcactggcat
ccccagaaggcaatgatcgttagcggcagcaaagataaccaacagcctatcaaaatttgg
gatcccaagagtggccttgcgctggcgacgcttcacgcgcacaaatcgactgttatggat
ctcaaatggaatgacaatggcaattggctggtcacagcctcgcgtgatcatctactgaag
ctcttcgatatacgtaatcttcgcgaggaggtgcaagtattccgtggacacaagaaggaa
gctagttctgtctcttggcatccaatacacgagggcctgttctgctcgggcgggtccgat
ggttctatcctcttttggaatgttggcacggacaaagaaatcggatgtgtggagacggca
cacgacagcatagtgtggacgcttgcatggcatccgttaggacacattctgtgttccggg
tccaacgaccatacgatcaagttctggacacgtaatcgacccggagatctgatgcgcgac
aaatacaatttgaatacactgcccgctagtttagctgcattagatgagtgcgagtatgat
gatgcggtaatacccggtatggggcccgaggacaaggtggaattcacagaaagtttgacg
gcagacaagggctttattccgggattggatttggatgcaggcggcagattgaccaatgac
cgcgatcgcgagaagaaagtgccctacagcaaacccataccacgtaacttccaagtccaa
tgggcaggaccacggcgagcagacgaccccagcgtgcttagcatacacgacgagctggca
gcacgagagtccaaagactctagcaatggcctgacgcaccagcagatcagcgagaacacg
ctcgaaggaatactggccagtggcatgcttaatggactggatccccagacaatagtgggt
atcttcgtctatggtcgatttatccgagtgcatcccgattcgcgattaatgggcgccatc
cgacaaggcgccgaatacctgaacaagtacatcgacgccggtaagctggaggagctgcgc
gacgttgttccgatgcgtgagcgtgaacgagagcgttccaggtctctgtcccccgccgtt
gagggggcacaggtacgcggcgaagtgtcgccgccgcttaaaaagtcgcgcttcgagcca
cgtcagcacaatgcacagttggtgtgtgtgcgagagctactgctattgaaaaaacccttc
ctgccgtccctgctgaccgtcaaagcgcagcagccgaaaaccgaattcattgacgaaccc
acgagctacggcagcggttcgcccttggatcaaatggtgcgcgaggactcgaatcgcccc
agtccttgggccgctactaacccctggacctatggcaatggaaatggaagtggcaatggc
ggcccagccaatcaaaatggatatggccatagtggaggcgacaattttaatgatcgggat
cgcgatcagttccaaaagagcagcaacaacaatgggcaacagcgtcgacgacgcggcaac
aacggcagctctggtggaggcgggggcgccggcggcggcggtggtcggaatagggctcgc
aataacagcagaaggttctaa
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integrated database retrieval system
