Drosophila arizonae: 108621853
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Entry
108621853 CDS
T05886
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
daz
Drosophila arizonae
Pathway
daz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108621853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daz03019
]
108621853
Messenger RNA biogenesis [BR:
daz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108621853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
FF
Motif
Other DBs
NCBI-GeneID:
108621853
NCBI-ProteinID:
XP_017874910
UniProt:
A0ABM1Q624
LinkDB
All DBs
Position
2
AA seq
701 aa
AA seq
DB search
MADDTNEDSWLYGTSNTDSTTNEVSNGSDALAAEHEALAAVTGEKPGAGCPLPAFPKEEL
LEYADFEDPAKEMEEDEEALPDTMASNARAAEPSGSSLDDAGSQGEDTDMTELPAGASGQ
ASRKERNGSGSDDDDDDDSDDDINVVIGDIKSAPSTYNIKQRPNLLAGATAADKAKPTAQ
AGKFSIEDFEGAGTINGVAVHEFSIDSLEEKPWRKPGADITDYFNYGFNEETWRAYCERQ
KRFRVAESGVGLASLTQNVNQSATSMAMPEGGSTANMNVPMGMGGPMHHHQPMVALGDGP
MQMPPPGMPPMMQHQPRPGMGMMARPPRPISTTGGVKENAIQVMTAECREYSRGGLGPMA
PNFPPPGASDEPFFHEPEPFDYGYEPTQESQWGNDNAGWVPTGIKELTPGPAHHPSQQQQ
QPPQLGGPAGMPPQMNVPPPQMSGPPPQLRGQHAPPGMMPPNMRMPHMGMGPPPGILRMP
PNLNMGSQRMPMGGNGGNGSTTNMPSSSDRRSDGYEDDRDRRRREKDKQLKKEQLRKDFL
DMLRERHDIERHTRWYDIKKKFEADPRYRALDSAYREEYFEDYLHILKEEKRKEREHKER
DRERSNREKARSRDKDKDKEKDKDKDKEKDKDKDKDKDKEKESSRRDGRSRSRDKSSRRK
SKSREKDRSERSSKQSSSTSSGSSSRTDKKKSHRKEKEEEE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacactaatgaggatagctggttgtatggcacatcgaatacagactcaacg
accaacgaagtatcaaacggcagcgatgcattggcggcggagcacgaggcacttgccgca
gtgaccggcgagaagccaggagctggttgcccattgcccgcctttcccaaggaggagctg
ctcgaatatgccgatttcgaggatcccgccaaggaaatggaagaagatgaagaagcgttg
ccggacacaatggctagcaatgcgcgagcagcagaacctagcggcagcagcttggacgat
gccggctcgcaaggggaagacactgatatgacggagttgccggctggtgcatctggacaa
gcatcgcgaaaagagcgcaatggctctggctccgatgatgatgacgatgacgactcagat
gatgatatcaatgttgtcattggcgacattaaatcggcgcccagcacctacaatatcaaa
cagcgaccaaatttgctagcaggcgccacagcggcggacaaagccaagcccacagcgcag
gccggcaagtttagcatcgaggatttcgagggcgctgggaccattaacggcgtggccgtg
catgagtttagcattgactcgctggaggagaagccctggcgcaaacccggtgctgatatt
accgattactttaactatggtttcaacgaggaaacatggcgtgcgtattgtgagcgccag
aaacggtttcgtgtggctgagagcggcgtgggcctggccagtcttactcaaaatgtgaat
cagagtgccacgtcgatggccatgccggaaggtggcagcacggccaatatgaacgttccc
atgggcatgggcggacccatgcatcatcaccagcccatggtggcgcttggtgatggacca
atgcaaatgccgccgccaggcatgccgcccatgatgcagcatcagccgcgcccaggcatg
ggaatgatggcgcgcccgccgcgtcctatatccaccacaggaggcgtcaaagagaatgcg
atacaggtgatgacggcagaatgtcgtgagtattcgcgcggcggtctaggaccgatggca
ccaaatttccccccacctggtgcttccgatgagcccttcttccatgagccggaaccgttt
gactatggctatgagcccactcaggaatcacaatggggcaacgataatgccggctgggtg
cccactggcattaaggagctaacacctggccccgctcaccatccctctcagcagcaacag
cagccgccccaattgggcgggccagcgggtatgccgccacaaatgaatgtaccaccaccc
cagatgagcggaccgccaccacagctgcggggacagcatgcgccgcccggcatgatgcca
cccaatatgcgaatgccacacatgggtatgggtccgccgcctggcatactgcgcatgccg
cccaacctgaacatgggctcccagaggatgcctatgggaggtaatggcggcaacggcagc
accaccaatatgccatcgtcatcagatcgcagatcggatggctacgaggatgaccgtgat
agacggcggcgcgaaaaggacaagcagctaaagaaagaacagctacgcaaagattttctg
gacatgttacgtgagcggcacgatatcgagcgtcatacgcgttggtatgatattaagaaa
aaattcgaagctgatccacgttaccgggcactggattcggcatatcgcgaggagtacttt
gaggattatttgcacatactcaaggaggagaagcgtaaggagcgtgagcataaggagcgc
gatagggagcgaagcaatcgtgaaaaggcgcgctcgcgtgataaggataaagacaaggag
aaggacaaggacaaagacaaagagaaggacaaggataaggataaggacaaggacaaagaa
aaagaaagctcaagacgtgacggacgctcgcgatcacgcgacaaatccagtcgtcggaaa
tccaaatcacgcgaaaaagatcgcagcgagcgcagcagtaaacaaagcagctcaacaagt
tccggttcgtccagtcgaaccgataagaagaaatcacatcgtaaagagaaagaagaggag
gaatag
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