Drosophila arizonae: 108621875
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Entry
108621875 CDS
T05886
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
daz
Drosophila arizonae
Pathway
daz03020
RNA polymerase
daz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
daz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108621875
09124 Replication and repair
03420 Nucleotide excision repair
108621875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
daz03021
]
108621875
03400 DNA repair and recombination proteins [BR:
daz03400
]
108621875
Enzymes [BR:
daz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108621875
Transcription machinery [BR:
daz03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108621875
DNA repair and recombination proteins [BR:
daz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108621875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
108621875
NCBI-ProteinID:
XP_017874946
LinkDB
All DBs
Position
2
AA seq
1176 aa
AA seq
DB search
MMYDNEEENFDEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIV
EDSPAIELQAEAQHTSGEVETPPRFSLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLT
YSAPLYVDITKTKNVEGMDPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPL
DPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKTEIRSCLEHSSRPTSTLWVNM
MARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMME
MVKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCET
KKAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYT
QKFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTL
SHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPS
PILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVS
EVSMIRDIRDREIRIYTDAGRICRPLLIVENGTLLLKKTHVEMLKERDYNNYSWQVLVAS
GVVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQ
SPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINS
IVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAENKRVGDQEENFEKPHRGTCQ
GMRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDSNTKRFAKRDASTFLRN
SETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTC
EGLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEY
GYHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGR
ARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECK
GCKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgataatgaagaagagaatttcgatgaggaaaatgcagaggaaatctctcac
gagctctggcaggaggcctgctggatcgtgatcaacgcctatttcgacgagaaaggcctt
gtgcgtcagcagctggacagcttcgatgagttcatacaaatgtctgtgcagcgcattgtt
gaggactcgccagccattgagctgcaggctgaggcccagcatacatctggcgaagtggag
acacctcctcgattttccctaaaattcgaacagatttacttgtccaagccgacgcattgg
gaaaaggatggctcacccagtcctatgatgcccaacgaggcgcgcttgcgcaatttgacc
tattcagctccactatatgtggatattacaaagacaaagaatgtcgagggcatggatccc
gtggagacgcagcatcaaaagaccttcattggcaaaattcccatcatgttgagatcaaca
tattgtctgctctcacagctcaccgatcgtgatttgactgagcttaacgagtgcccgcta
gatccgggtggctacttcatcattaacggctcagagaaagtcctcatcgcccaggagaag
atggccacgaacacggtgtacgtattcagcatgaaggatggcaagtacgccttcaaaacg
gagatacgctcctgcctggagcacagctcgcgccccacctctacgctctgggtgaacatg
atggcgcgtggctcgcaaaacatcaagaaatcggcgattggacagcggatcattgccatt
ctcccatacattaagcaagagatacccataatgatagtttttcgtgccctgggatttgtg
gctgatcgcgatattttagagcatattatatacgactttgacgatcccgagatgatggag
atggtgaagccctccctggacgaggccttcgtggtgcaggagcagaatgtagcccttaat
ttcattggcgctcgcggcgcacgccccggcgtcaccaaggacaagcgtataaagtacgcc
aaggaaattctgcagaaggaaatgttgccgcatgtcggcgtctctgacttttgcgagaca
aagaaggcctattttctagggtacatggtgcatcgcttgctgctggcctcgctgggtcgc
cgagagctcgacgatcgtgatcactatggcaacaagcgcctggatcttgctggtcctctg
ctggccttcctcttccgtggcctcttcaagaacttgatgaaagaggtgcgcatgtacaca
cagaagttcattgaccgcggcaaggacttcaatctggagctggccataaaaacaaacatt
atcactgacggtctgcgctactcgctggccaccggcaactggggcgatcagaagaaggcg
catcaggctcgcgccggtgtctcgcaggtgttgaatcgtctcacattcgcctccacattg
tcccatctgcgtcgcgtcaactcacccattggacgcgacggcaagctggccaagccacgt
cagttgcataacacactgtggggcatgttgtgtccggcagaaacgcctgagggcgcagct
gtgggcttggtaaagaatctggcactgatggcttacatttccgtgggctcacagccgtcg
ccgattctggagttcttggaagagtggtcaatggagaatctggaggaaatcgcgccctct
gctattgcagatgctaccaaaatcttcgtgaatggctgttgggtgggcatacatcgagat
cccgagcaactgatggccacactgcgtaagctgcgtcgtcagatggacatcattgtatca
gaggtgtccatgattcgcgacattcgcgatcgcgagatccgaatctacacagatgcgggt
cgcatttgtagacctctgctcattgtcgagaatggcacgctactgttaaagaagactcac
gtggagatgttgaaggagcgagactacaataactacagctggcaggtgctggttgcttct
ggtgttgttgagtacattgacacactcgaggaggaaacggtcatgattgccatgtcgccc
tacgatctcaagcaggacaaggactacgcctattgtaccacctacactcactgtgagatt
catccggccatgatcttgggtgtctgtgcctctattatacccttccccgatcacaatcag
agtccacgtaacacctatcaaagcgctatgggtaagcaggccatgggtgtatatataacc
aacttccacgtacgtatggacaccctggcgcacgtgctgtattatcccatgaagccattg
gtgacaacccgatccatggagtatttgcgtttccgtgagcttcctgcgggcatcaattcg
attgtggctattttgtgctacactggatacaaccaggaggattccgttattctgaatgcc
tccgccgtggagcgtggcttcttccggtcggtgttctatcgatcgtacaaggatgcggag
aataaacgcgtcggtgatcaagaagagaactttgagaaaccgcatcgcggcacttgccag
ggcatgcgaaacgctcattatgacaaactggacgatgatggcatcattgcgcctggcatt
cgtgtctctggcgacgatgtcgtcattggcaagacaattacgctacccgagaacgacgat
gaactggacagcaatacaaagcgattcgccaagcgcgatgcctccacatttttgcgtaac
tctgagacgggcattgtagatcaggttatgttgacactaaacagcgagggctacaagttc
tgcaagattcgtgtgcgttccgtgcgcataccacagattggcgacaagttcgcctctcgt
cacgggcagaagggaacatgtggcatccagtatcgacaggaggacatgccgttcacctgc
gagggattggcgccagatattatcatcaatccccacgccattccctctcgtatgacaatt
ggccatttgatcgagtgtctgcagggaaagcttggctccaataagggcgaaatcggcgac
gccacgcccttcaacgatgccgtcaacgtacaaaagatttctactttccttcaggagtac
ggctaccatctacgtggcaacgaggtcatgtacaatggtcacactggccggaaaattaat
gctcaggtatttttgggcccaacctactatcagcgcctcaagcacatggtggacgacaaa
atccactcccgtgcccgtggtccagtgcagatcctagtgcgccagcctatggagggcaga
gcccgtgacggcggcttgcgtttcggtgagatggagcgtgactgtcaaatctctcacggt
gctgctcagttcctgcgcgagcgactgttcgaagtgtccgatccgtatcgcgtgcacatt
tgcaacttttgcggcctgattgccattgccaatctgcgcaacaatacgttcgagtgcaaa
ggctgcaagaacaagacgcagatctcgcaagtgagactgccgtacgcggcgaagctgctc
ttccaggagctcatgtcaatgaacatagcgccgcgcctgatggttagctga
DBGET
integrated database retrieval system
