Desulfomicrobium baculatum: Dbac_0259
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Entry
Dbac_0259 CDS
T00963
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dba
Desulfomicrobium baculatum
Pathway
dba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dbac_0259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dba03400
]
Dbac_0259
Enzymes [BR:
dba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dbac_0259
DNA repair and recombination proteins [BR:
dba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dbac_0259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
Zn_ribbon_PriA
Helicase_C
PriA_3primeBD
ResIII
AAA_16
AAA_30
Zn_ribbon_6
Bowman-Birk_leg
SRP54
Zn_ribbon_LysW
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
ACU88386
UniProt:
C7LUV2
LinkDB
All DBs
Position
304721..307030
Genome browser
AA seq
769 aa
AA seq
DB search
MREFCSVLLLSSPYSVLTYALPEDLPRRMWHVGARVVVPLGKSFRVGILTEDNASEPGGC
VCKDVLWPVDPAPFFSAGYLDFIRDLSIRQMDAAGKILARVLPAALRDLPLFKTQEGQAV
RLGELTAADARAGLAQDWLAGRFAPYVCPRRQERLFSLTTEPPWPVRPQATAQLDVLRYL
DVHGVSSAKVLNTHFGKNVSQPLRVLLKKGLVREIESHFQPEEVCAPAAAAFSLTAEQQQ
AVEGCWELLAERDPRSALLFGVTGSGKTAVYLELARRCLCLGKHVMLLAPEVGIALKLYR
DVSEALPEAGLRLYHGYLNPSERQRTFMELAGQAPPCIVVGTRSSLFLPIEPGLVILDEE
HDASFKQDEGLIYQARELAYGRITRSGGLLLMGSATPDVKVFHAARNGGIALNRLPNRVG
EARLPEVRLVDLRVEPPEHGPFATSVRDALVEAVQASEQVIILHNRRGYSPVLYCEACSE
PVKCPHCQVSMTLHKRRELLLCHYCGYSLQFPLSCPGCKGNEFLPLGAGTERLEEFLRDD
LPRDTKILRLDRDTSRRAGSMQETLSAFARQEAQILVGTQMLSKGHHFPGVTLVVVVDGD
LGLNLPDYRATERSFQMLVQVAGRAGRGEKNGRVLIQTRNPGHYCWQFVRENDYEGFFTR
EIALRQTMGYPPFVKLALVRISMPLDQPEADLLAAFGSRMRLVCPAAGVRILGPAPAPLS
VLRGRKRFQCLLKADTWPAIRGVYAQMREILAKEKNVRISVDLDPMDML
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaattctgttccgtccttcttctctcttcgccctacagcgtgctgacctacgcc
ctgcccgaggatctgccccggcggatgtggcatgtcggcgcgcgtgtcgtcgtgccgctg
ggcaagtcgttccgggtcggcatactgacggaagacaacgcgagcgagcccggaggctgc
gtctgcaaggatgtgctctggcccgtggacccggccccttttttcagcgccggatatctt
gatttcatacgcgatctgtccattcgccagatggacgccgcaggaaagatcctggcgcgc
gtgctgcctgctgcgctccgtgatttgcccttgttcaagacccaggaggggcaggccgtc
aggcttggagaattgactgcggcggatgcgcgcgcgggactggctcaggactggctggcg
ggccggttcgcgccctatgtctgcccacgcaggcaggaacggctcttttccctgaccacg
gaacccccgtggccggtgcgcccgcaggccacggcgcagcttgacgtcctgcgctatctg
gacgtgcatggcgtctcgtccgccaaggttttgaacacgcatttcgggaagaatgtgtcc
cagcccctgcgtgttcttctgaagaagggcctggtccgcgagatcgagtcccattttcag
cccgaggaagtctgtgctccggcggccgcagccttcagcctgaccgctgagcagcagcag
gcggtggaaggatgctgggaactgctggcggagcgggacccgcgttcggcgctgctcttt
ggagtgaccggaagcggaaagacggcagtctatctggagttggccagacgctgtctttgc
ctcggaaaacatgtcatgctcctggctccggaggtgggcatcgccctcaagctctaccgg
gacgtgagcgaggccctgcccgaggccgggctccggctctatcacggctacctcaatccg
agcgagcggcaaagaaccttcatggagcttgcaggacaggctccgccctgcattgtcgtc
ggcacccgctccagcctttttttgcccatcgagcccgggctggtcattttggacgaagag
catgacgcttcattcaagcaggacgaggggctcatttatcaggcccgcgagctggcctac
ggtcggatcacccgcagcggggggcttttgctcatgggctcggccactccggatgtgaag
gtcttccacgccgccagaaacgggggcatcgccctcaatcgtctgcccaaccgggtggga
gaggcccggttgccggaagtccggttggtcgatctgcgcgttgagccgccggagcatggt
cctttcgccacctctgtgcgcgacgccctggtggaggccgtacaggcctcagagcaggtc
attattttgcacaaccggcgcggctattcgcccgtgctctattgcgaggcctgctccgaa
cccgtcaaatgcccgcattgccaggtctccatgaccctgcacaagaggcgtgagctgttg
ctctgtcattattgcggctactcgttgcaatttcccctgtcctgtcccggatgcaagggt
aacgaatttctgccgctgggtgcgggaacagagaggctcgaagaatttttgcgcgacgat
ctgccccgggacaccaaaatcttgcgtctggaccgcgacacttcccgccgcgccggctcc
atgcaggagactctgtccgcctttgcccggcaggaggcgcagattctggtcgggacccag
atgctcagcaaggggcatcattttcccggcgtgacgctggtggtggtcgtggacggagat
ctgggcttgaatcttcccgattacagggctacggaacgatcgttccagatgctggtgcag
gtggcggggcgcgccggacgtggggaaaagaacggccgggtgctgatccagacccgcaat
cccgggcactactgctggcagttcgtgcgcgagaatgattacgaggggtttttcacccgc
gagatcgccttgcggcagaccatggggtacccgccctttgtcaaactcgcgttggtgcgg
atttcgatgcctctggaccagcccgaagcggacctcctggccgctttcggaagtcgcatg
cgcctggtgtgcccggcggccggagtgcgaattctgggacccgcgcccgcgccgctttcg
gtgctgcgcggccgcaagcgctttcaatgtttgcttaaagccgatacatggccggcgatc
cggggcgtttacgcacaaatgcgggaaatcctggccaaggaaaaaaatgttcgcatttcc
gtggatctcgatcccatggacatgctttag
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