Desulfomicrobium baculatum: Dbac_0373
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Entry
Dbac_0373 CDS
T00963
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dba
Desulfomicrobium baculatum
Pathway
dba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dbac_0373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dba03400
]
Dbac_0373
Enzymes [BR:
dba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Dbac_0373
DNA repair and recombination proteins [BR:
dba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dbac_0373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ACU88500
UniProt:
C7LVF8
LinkDB
All DBs
Position
complement(443968..447162)
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AA seq
1064 aa
AA seq
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MEGFLLHASNRLENLAELLAEVLKTPLDPMEPETILVQSGGMQRWVSMQLARRHGVCANT
RFPFPVGFAYALCRELRADLPREYPLSQERMLWRITHLLRGLLDEPEFAPLARYVQEDSE
LRSVQLAERIAYHFDQYLIFRPEWAARWENHEPSGNFLLPGHVASEAWQARLWRELIRDM
GGEHRAALLRRAIASLEKGTSLPDLPSRVCVFGIPTLPPVYLDLLKALSRHSQVHVFLLS
PCQKYWGDLLTHRERRRAYRAGEHASPERPEDAMPLAGLGAVGKEFLELLMERDALETGL
YEEPVGDTMLGQLQADLLDLDVREEKTDFSDTSIQVHCCHSPLREMEILKDLILDLLAKD
TSLSPQDILVMNPDIERYAPVIQAVFGTAGEDGIPFSISDRKPTKAAETIRLFLELLEFG
QHRFEASRVCALLEAPPVRQRLGLDASDTQRVLEWVRASGVRWGLDLDFRRKAGLGDFGQ
NTWESGLSRLYLGYMTGAADPLGGIAPLALRGSAEQELLGRVTAWIDELATLWSRLRDTR
TPADWQDCLLWILDAFFPQDPAQAEHLLAIRKAVTDLTRDMGDFEADARTMLYLIRKRLD
ESGGESGFLASGLTFCGLKPMRSIPFRVICLTGLTSTAFPRQDIPLGFDLMAARPRPGDR
SHREDDRYLFLESIISARDNLILTYPGLSQSDNLEAPPSVLVSELLDFLDRGCTVDGLTP
SEAIVFKHKLQAFHPDYFSAGSPIFSYSAQNRDAAQALFAEHQSRQFFPEASTLEGAHAE
QEIEIDIEELTRFLTHPCRHLLRALRIDPTGGEDDFLDEEPLATPTGLEAYGPLQDLLRT
ALDEPAANLEGLLLAWQLLPPGQAGTDASRKLCSQIRALADQARAVIGDEKPLRLDLKLP
LGRITLTGRIDLHGDRFVTCRPAKTKSSDMLRLWVRHLAASATGHAVQSMHIGTDDCFPA
PEAPNARNLLEGLLRLYTRGMRAPIHLFPRTSLAFAEARFTGRKPKERPEALMQAMRQWE
GGYMVSPERDDPHLAFLFRDTEPDWERFADVAEEIYGPILGGAE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctttctcctccacgcctccaaccgcctggaaaacctggccgaactgctggcc
gaggtcctgaaaactccgctggaccccatggagcctgagaccattttggtccagtccggc
ggcatgcagcgctgggtctccatgcagctggcccgccggcacggggtctgtgccaatacc
cgcttcccctttcccgttggcttcgcctatgcgctctgccgagaactgcgggccgacctg
ccacgtgaatacccgctcagtcaggaacgcatgctgtggcgcatcacgcacctgctgcgc
gggctgctggacgagccggagttcgcgccgctggcgcgttacgtacaggaggattcggag
ctcaggtccgtgcagttggccgagcgcatcgcctatcatttcgaccagtacctcatcttc
cgcccggaatgggccgcacgctgggagaaccatgaaccgagcgggaattttctcctgccc
ggtcacgtcgccagcgaagcctggcaggccagactttggagggaactgatccgggacatg
ggcggagagcatcgcgcggcgctgctgcggcgggctatcgccagtctggaaaagggcact
tccctgcccgatcttccgtcgcgcgtctgcgtcttcggaataccgaccctgccgccggtc
tatctggatcttctgaaagccttgtccaggcacagccaagtgcatgtcttcctactcagc
ccttgccaaaaatactggggcgatcttctgactcatcgggaacgtcggcgcgcctaccgt
gccggagaacacgcctccccggaacgacccgaggacgcaatgccgctggcaggtctcggc
gcggtgggaaaagaatttctggaactgctgatggaacgggacgcgctggaaacggggctg
tacgaggagccagtcggggataccatgctcggacaactccaggccgaccttcttgatctg
gacgttcgcgaggaaaagacggacttctccgacacctccatccaggtccactgctgccac
agtcccttgcgcgagatggagatcctcaaagacctgatcctcgacctcctggccaaagac
acgtccctctcgccacaggacatccttgtcatgaacccggacatcgagaggtacgctccg
gtcatccaggccgtgttcgggactgccggcgaggacggcatcccattctccatctccgac
cgcaaacccaccaaggccgccgaaaccatccgcctctttctggagttgcttgagttcgga
cagcaccgtttcgaagcatcgcgcgtctgcgccctgctcgaagccccgccagtgcggcaa
cgactgggcctggatgcgtccgatacgcagcgagtgttggaatgggtgcgcgcatcgggc
gtgcgctgggggctggacctggatttccgcaggaaggcgggcctgggggatttcggtcag
aacacttgggagagcggcctgtcccgcctgtacctcgggtacatgaccggcgcggcggac
ccgctgggcggcatcgcccctctggcgctgcgcggctcggccgagcaggagctgctgggc
cgcgtgacagcctggatcgacgaactcgccaccctgtggtccaggctgcgggacacgcgt
acgccagccgactggcaggactgcctgctgtggatcctggatgccttcttcccccaggac
cccgcccaggccgagcacctgctggccatccgcaaggccgtgaccgacctgacccgcgac
atgggcgatttcgaggccgacgcacgaaccatgctctacctcatccgcaagcgcctggac
gagagcggcggcgagtcgggcttcctggcctcgggcctgaccttctgcggcctgaaacca
atgcgctccatcccctttcgggtcatctgcctgacgggcctgaccagcacggccttccca
cgccaggacatacccctgggcttcgacctcatggccgcccgcccccgtcccggcgaccgc
agccatcgcgaagacgaccgctacctgttcctggagagcatcatctcggcccgggacaac
ctcatcctgacctaccccggcctgtcccagtccgacaaccttgaggccccaccctcggtc
ctggtctcggaactgctcgatttcctggacaggggctgcacggttgatggcctaacgccg
tcggaggccattgttttcaagcacaagctccaggccttccatcctgactatttcagcgca
gggtcgcccatcttttcctattcggcccaaaaccgtgacgcggcgcaggcgctgtttgcc
gagcatcagtccaggcaattcttccccgaagccagtactcttgaaggtgcacatgcagag
caggagatcgagatcgacatcgaagagctgacgcgcttcctgacccacccctgccgccac
ctgctgcgcgccctgcgcatcgacccgaccggaggcgaggacgattttctggacgaggaa
cccctggccacgcccacgggccttgaagcctacggtcccctgcaggaccttctgcgcacg
gccctggacgagcccgccgccaatctggaggggctgctcctggcctggcagctcctgcct
ccgggccaggccgggacagacgcgagccgcaagctctgctcccaaatccgcgccctggcc
gatcaggcacgggccgtcatcggcgacgaaaaacccttgcgcctcgacctgaagctgccc
ttgggccgcatcaccctgacgggccgcatcgacctccacggcgaccgcttcgtgacctgc
cgcccggccaagaccaaaagctcggacatgctccgcctgtgggtccgccatctggccgcc
tcggccacgggccatgccgtccagtccatgcacatcggcaccgatgactgcttccccgca
ccagaggccccgaacgcccggaacctcctcgaagggttactgcgactctacacgcggggc
atgcgcgcccccatccatctcttcccacggacctccctggccttcgccgaggcccgcttt
acgggccgcaagcccaaggagcgccccgaggcattgatgcaggccatgcgccagtgggaa
ggcggctacatggtcagtcccgaacgcgacgacccgcatctggccttcctcttccgcgac
accgaaccggactgggagcgtttcgcggacgtggccgaagaaatttacggccccattctg
ggaggtgccgagtga
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