Desulfomicrobium baculatum: Dbac_0677
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Entry
Dbac_0677 CDS
T00963
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dba
Desulfomicrobium baculatum
Pathway
dba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dbac_0677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dba03021
]
Dbac_0677
03019 Messenger RNA biogenesis [BR:
dba03019
]
Dbac_0677
Transcription machinery [BR:
dba03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Dbac_0677
Messenger RNA biogenesis [BR:
dba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Dbac_0677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA
AAA_22
AAA_25
AAA_2
ATPase_2
OB_RNB
AAA_14
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ACU88800
UniProt:
C7LN30
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All DBs
Position
751290..752537
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AA seq
415 aa
AA seq
DB search
MNLSELKTKSMSELMDIAGEYQIENMSGLRKQELIFALLQACASQNGSIFGEGVLEILPD
GFGFLRSPMYSYMPGPDDIYVSPSQIRRFGLRTGDVISGQIRPPKEGERYFALLRVKEIC
FREPEEAKRIVLFDNLTPIYPDEQFRLENGDKNYSARILDLMTPIGKGQRALIVAPPRTG
KTMLMQSIANSISVNHPDAYLIVLLIDERPEEVTDMERTVRAEVISSTFDEPPQRHVQVA
EMVLEKAKRLVERKVDVVVLLDSITRLGRAYNATTPSSGRVLSGGLDANALQRPKRFFGA
ARNIEEGGSLTIISTALVDTGSRMDEVIFEEFKGTGNSDIYLDRHLSDKRVFPAIDLNRS
GTRKEELLLAPDVLNKVWILRRIMASMNSVDSMDFLLDKMRGTKSNKDFLDMMNS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttctgagttgaaaaccaagtccatgtccgaacttatggacattgccggcgag
tatcagattgaaaatatgagcggtctgcgcaagcaggagcttattttcgccctgcttcag
gcctgcgcttcccaaaacggttccattttcggcgagggcgtactcgaaatcctgcccgac
ggctttggttttctgcgctcgcccatgtacagctacatgccgggcccggacgatatttac
gtctcgccctcgcagatcaggcgtttcggactgcgcaccggtgacgtcatctccggccag
atccgtccgcccaaggaaggggagcgttacttcgcgctgctgcgggtcaaggagatctgc
ttccgcgaacccgaggaagccaagcgcattgttcttttcgacaacctcacccccatctat
cccgacgagcagttccggctggaaaacggtgacaagaactactccgcccgcatcctcgac
ctcatgacccccataggcaagggccagcgcgctctgattgttgccccgccgcgcaccggc
aagaccatgctgatgcagtccatcgccaactccatcagcgtcaaccaccccgacgcctat
ctcatcgtgctgctgatcgacgagcgacccgaggaagtcacggacatggagcgcacggtc
agggccgaggttatcagctccacctttgacgaaccgccgcagcggcatgtgcaggtggcc
gagatggtgctcgaaaaggccaagcgcctggttgagcgcaaggtcgacgtggtggttctg
cttgactccatcacccgtttgggccgtgcctacaatgcgaccaccccttcttcgggccgg
gttctgtccggcggtctggacgccaacgccctgcagcggcccaaacgctttttcggcgcg
gcccgcaacatcgaagagggcggcagcctgaccatcatctccaccgccctggtcgatacc
ggctcgcgcatggacgaggtcatcttcgaggaattcaagggcacgggcaactcggacatc
tatcttgatcgtcatctgtccgacaagcgcgtcttcccggccatcgatctcaatcgttcc
ggcacccgcaaggaagagctgctgcttgcgcccgatgttttgaacaaggtttggatcctg
cgccgtatcatggcctccatgaattccgtggacagcatggattttctgttggacaaaatg
cgcggcaccaagagcaacaaggattttctggacatgatgaattcctga
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