Desulfomicrobium baculatum: Dbac_0939
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Entry
Dbac_0939 CDS
T00963
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
dba
Desulfomicrobium baculatum
Pathway
dba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Dbac_0939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dba03400
]
Dbac_0939
Enzymes [BR:
dba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Dbac_0939
DNA repair and recombination proteins [BR:
dba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Dbac_0939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACU89054
UniProt:
C7LQ28
LinkDB
All DBs
Position
1022812..1024182
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AA seq
456 aa
AA seq
DB search
MHIFSVRTLTQAIKDVLEGEFPFVWVRGQVSNLSRPPSGHVYFSLKDDDATLSVVWFKGA
QPKGSVDGGERVNPVTGEVESGEPFALCDGQEVLVAGRMNVYPPRGAYQLVAELVQGQGL
GELAVAFEAMKAKLAAKGYFDPDRKMVLPRNPRRVAVVTAPQGAALQDFLRIADDRGYGA
TIRVYPSLVQGESAPAQIAAALDRADRDGWAEVIALIRGGGSLEDLWAFNTEPVAEAVFR
ARLPVVCGVGHEVDTSIADLVADQRAATPSHAAQILWTERGVLRQQADEIFLALTRGMDR
LLDLRERDLQRHAQGLAWHSPARRIERGGFELERLAGRLRQAIRTQVESRAATLVRLEDR
MYRSFGPAAMLSLRSELDRAQGALEQVGSRFVRVRLESLRGVEGRLAALDPAAPLARGYA
LVRGSAGFVRSREDVQAGDEIRVQVADGEFSAEVLP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcttctccgtccgtaccctcacccaagccatcaaggatgtccttgaaggcgaa
ttcccgttcgtctgggtccggggacaggtttccaacctttctcgtccgccgtccgggcat
gtgtatttttccctcaaggacgatgacgccaccttgagcgtggtctggttcaagggggcg
cagcccaagggttccgtggacggtggcgagcgggtcaatcctgttaccggcgaggtggag
agcggggagccttttgcgctgtgcgatgggcaggaagtgctcgtggccgggcgcatgaat
gtctatccgccgcgcggggcctatcagctggtggcggagttggtgcaggggcagggcttg
ggcgagctggccgtggcctttgaggccatgaaggccaagcttgccgccaagggctatttc
gatccggaccgcaaaatggtcctgccgcgcaatccgcgccgcgttgccgtggtcacggct
ccccagggcgcggccttgcaggattttttgcgcatcgcggatgaccggggctatggggcc
accattcgggtctatccgagcctggtgcagggcgagagcgctccggcgcagattgccgcc
gccctggaccgcgccgaccgggacgggtgggccgaggtcatcgcgctcattcgcggcggc
gggtccctcgaagacctgtgggccttcaacaccgagcccgtggccgaggccgtgttccgg
gcgcggctgccggtcgtgtgcggcgtggggcatgaagtggacacgagcatagccgatctg
gtggcggaccagcgcgcggccacgccgtcgcatgcggcgcagattttgtggaccgaacgc
ggcgtgctgcgtcagcaggccgacgaaatttttctggctctgacgcgcggcatggatcgc
ctgctggacctgcgcgagcgcgacctgcagcgccatgcgcagggtcttgcctggcattcc
ccggcccggcgcatcgagcgcggcggctttgaactggagcgcctggctggccgtctgcgg
caggccattcgcacgcaggtggaaagccgcgccgcgaccctggtgcgtctggaggatcgg
atgtatcgatcctttggcccggccgcgatgctgtcgctgcgttcggaactggacagggcg
caaggggccctggaacaggtcggaagccgcttcgtgcgtgtccgcctggagagtctgcgc
ggagtcgagggccgtctggccgccctggaccctgcggccccgctggcgcgtggatacgcg
ctggtccgaggttcggccggttttgttcgttcgcgggaggatgtgcaggcgggggatgag
atccgggtgcaggtggcggacggagaattttcagcggaggtgctgccatga
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