Desulfomicrobium baculatum: Dbac_1076
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Entry
Dbac_1076 CDS
T00963
Name
(GenBank) sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dba
Desulfomicrobium baculatum
Brite
KEGG Orthology (KO) [BR:
dba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dba03000
]
Dbac_1076
Transcription factors [BR:
dba03000
]
Prokaryotic type
Helix-turn-helix
Other families
Dbac_1076
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_3
HTH_8
AAA_5
AAA_2
AAA
GAF_2
PAS
AAA_16
PAS_4
AAA_19
TIP49
AAA_3
AAA_7
HTH_30
TsaE
Motif
Other DBs
NCBI-ProteinID:
ACU89184
UniProt:
C7LQV5
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All DBs
Position
1180773..1182698
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AA seq
641 aa
AA seq
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MDDIFNLQKLTSAISASMVMASSESLDGVINRALDSMLSFLEIARIGLLAVDESSPVINV
DYASYAKDAPHVSKQINLAALFPWTYDLVIGRGQTMVMASLDDLPSEAEEDRRSHTMLGN
KSALIIPLFIGSRVHHLLTLDARKTERDWPEEVVVQGRLLGEIFVSALQRREAESSLRRT
KERLDIAALSAEIGLWELNLDTGSLWATPKAKEHFGFDPDTELTLSRLLDVIHPEDHGLI
SAKVEESRHTREELMVEYRVRAGDGSLRWMISRGRSLWENGHAGLLLGVTVDVTARKEME
LQLQTHIREIESLKVKLERENQYLRLEVAAAEGQGEILGSSEAMRAIMSQVRMVAQTGST
VLLQGETGTGKNLVASTIHRLSGRGKKAMIRVNCAALPGPLVESELFGREKGAYTGALSR
QAGRFELADGSTLFLDEIAEMSLETQAKLLRVIQDGEFERLGSSKTIKVNVRIIAASNRD
LAKEVEAGRFRGDLFYRLNIFPIRVPPLRERPEDIPQLVMEFIREFGDRMGKRILRVAHK
DMQLLTNYSWPGNIRELRNVIEHSLIITPCDTLVLQRLTASPEFHDADASLEEVERRHIQ
AVLKATGGRIKGFGGAAERLRINPSTLYSRMRKLGIGFKQP
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggacgatatcttcaatctgcaaaaactgacatccgcaatatcggcctccatggtcatg
gcttcatcggagagccttgacggcgtgatcaatcgtgctcttgatagtatgctctctttc
cttgagatcgcccgcattgggttgcttgcggtcgatgaaagcagcccggtgattaatgtc
gattatgcgagttatgccaaagacgctccccatgtttcgaaacagatcaacctggcggcc
ttgtttccatggacctacgatctggtcatcggcagagggcaaaccatggtcatggccagc
ctggacgacctgccgtccgaagccgaggaagatcggcggtcgcacacgatgcttggcaac
aaatccgccttgattatccctcttttcatcggttccagggtgcatcacctgctgactctg
gacgcccgcaagacagagcgcgactggcccgaggaggtcgtcgtccagggccggctgctg
ggcgaaatttttgtcagcgccctgcaacgccgtgaggcggaatccagcctgcgacgcacc
aaagaacggctcgatattgcggcgctttcggcggagatcgggttgtgggaactcaatctg
gataccggcagcttgtgggccacacccaaggccaaggagcatttcgggtttgatccggac
acggaattgactttgtcacggttgctggacgtgatccatcctgaagaccatgggctgatc
agcgccaaggtggaggagtcgcgccatacccgcgaggaactcatggtggagtaccgtgtt
cgggccggggacggatctttgcgctggatgatctcacgcggtcggagcctctgggagaat
gggcatgccggcctcctgctcggggttaccgtagatgtcacggcgcgcaaggagatggaa
ctgcagcttcagacgcacatacgggagatcgagagcctcaaagtgaagctggaaagggag
aaccagtatttgcgcctggaggtggcggcggccgagggacagggggagattctgggctcc
agcgaagccatgcgagccatcatgtcgcaggtcaggatggttgcgcagaccgggagtacg
gtgcttctgcagggggaaaccggaacggggaaaaatctggtcgcaagcaccatccatcgt
ttgagcggtcgcggtaaaaaggccatgatcagggtcaactgtgccgcgctgcctggtcct
ctggtcgagagcgaactgttcggtcgcgagaagggcgcctacaccggggcactgagccgc
caggccgggcgtttcgagctggcggacggctccaccctttttctcgacgaaattgccgaa
atgtctctcgaaacccaggccaagctgctgcgcgtgattcaggacggcgagttcgaacgc
ctgggcagttccaagaccatcaaggtcaatgtgcggatcattgcggccagcaacagggat
ctggccaaggaagtcgaagcggggcgctttcgtggcgatctcttctaccggctgaatatt
ttccccatccgagttcccccgctgcgggaacgtcccgaggatattccgcaactggtcatg
gagttcatcagggaattcggcgatcgcatgggcaagcggattctgcgcgtcgcccacaag
gatatgcagctgctgacaaactactcctggcccggcaacatccgcgagctgcgcaacgtg
atcgagcattccctcatcatcaccccctgcgacaccttggtattgcagcgtttaactgcc
agtccggaatttcatgatgcggacgcatcccttgaggaggtcgaacgcagacacatccag
gccgttctcaaggcgacaggcggcaggatcaagggctttggcggggcggcggagcgtctg
aggatcaacccctcaacgctctactcccgcatgcgcaagctcggcatcggctttaaacaa
ccttga
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