Desulfomicrobium baculatum: Dbac_2055
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Entry
Dbac_2055 CDS
T00963
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dba
Desulfomicrobium baculatum
Brite
KEGG Orthology (KO) [BR:
dba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dba03016
]
Dbac_2055
Enzymes [BR:
dba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Dbac_2055
Transfer RNA biogenesis [BR:
dba03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Dbac_2055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ACU90141
UniProt:
C7LNR7
LinkDB
All DBs
Position
complement(2362127..2362681)
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AA seq
184 aa
AA seq
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MRLFIGIPLPGEYAQIIGRIQEAWKKRLTSKMSWVRPDLAHVTLKFLGEVDEDRVVAIVQ
AMREAARGSFEMQGGAGGFFPPKGAPRVIWVGLRQGREECAAYFEELDGGLAQAGFVAES
KPFAAHLTVARVKAAMRSDDWSGLLVDLKRDWPAFTVSHVVLWQSILKSSGPEYRRVAEV
GLEK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcttcataggcatcccccttcccggcgagtacgcgcaaatcattggcaggatt
caagaggcgtggaaaaagcgtctgacttcgaagatgtcgtgggtgcggccggatctggct
catgtgacgctcaagtttctgggcgaagtggatgaggatagggttgtggccattgtccag
gcgatgcgggaggcggctcggggaagttttgagatgcaggggggcgcgggcggttttttt
cctcccaaaggcgcgccgcgtgtgatctgggtcggtttgcgccaggggcgcgaggagtgc
gcggcgtattttgaggaacttgatggaggattggctcaggccgggtttgtggccgagtcg
aaaccctttgccgcgcacctgaccgtggcccgggtcaaggccgccatgcgaagcgacgat
tggtccggtctgctcgtagatttgaagagggattggcctgcgttcacggtgagtcatgtc
gtgctctggcagagcatcctgaagtcctccgggccggagtatcgaagagtggcggaagtg
ggactggagaaatga
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