Desulfomicrobium baculatum: Dbac_2080
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Entry
Dbac_2080 CDS
T00963
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
dba
Desulfomicrobium baculatum
Pathway
dba03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dbac_2080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dba03400
]
Dbac_2080
DNA repair and recombination proteins [BR:
dba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dbac_2080
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dbac_2080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
AAA_5
DUF1978
Motif
Other DBs
NCBI-ProteinID:
ACU90165
UniProt:
C7LNU1
LinkDB
All DBs
Position
complement(2386405..2388417)
Genome browser
AA seq
670 aa
AA seq
DB search
MSLFQLESEYVPRGDQPAAIDALCSGIRQGVRDQVLLGVTGSGKTFTMGHVIARLDRPAL
IMAPNKTLAAQLYNEFKGLFPRNAVEYFVSYYDYYQPEAYLPHSDTYIEKDSAINDDIDK
LRHAATHALLTRRDVIIIASVSCIYGLGSPEYYAKMVIPVECGQHVAMETVIGRLVDVQY
ERNDYDLHRGTFRVRGDVLEIIPAYEHEQALRLEFFGDEIDGIYETDPLTGEILSRVQKT
VIYPASHYVSDRDNLVRAMADIRDELRLRLQYFQDNNMLVEAQRLEQKTQLDLEMIEELG
YCNGIENYSLHLDGRRTGQPPSTLIDYFPKDFLLFMDESHISVSQVGAMFKGDRSRKQTL
VDYGFRLPSALDNRPLNFEEFLERIGTTVFVSATPAPWELERAQGVVVEQIIRPTGLVDP
QIEVVPTAGQMDHLMAQCLARIAVDERVMVTTLTKRMAEDLTEFLQARGVRARYLHSDID
TLERVAIIQALRAGEFDVLVGINLLREGLDIPEVSLVAMLDADKEGFLRSTRSLIQTFGR
AARNVKGKVLLYADTVTRSMAEAMGETQRRRERQTLYNEEHGITPQSIRKTSENTLYDLH
REIKEQERAAERTADYDPGPENAAKEVARLSREMRKAAEMLEFEEAARIRDRIKTLEKRY
GLDGSRATRS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctttcagcttgaatccgaatatgttccgcgcggcgatcagccggcggccatc
gacgccctctgctcgggcatccggcagggcgtgcgcgatcaggtgctgcttggcgtgacc
ggttccggcaagaccttcaccatgggccatgtcatcgccaggctggaccggcccgccctg
atcatggctcccaacaagacccttgccgcgcagctctacaacgagttcaagggcctcttc
ccgcgcaacgccgtcgaatatttcgtcagttattacgactactaccaacccgaagcctat
ctgccgcattccgacacgtacatcgagaaggattcggccatcaacgacgacatcgacaaa
ctgcgtcacgccgcgacccacgccctgttgacccggcgtgacgtgatcatcatcgcttcc
gtgtcctgcatttacggactgggttcgcccgaatactatgccaagatggtcatcccggtg
gaatgcggacagcacgtcgccatggagacggtcatcgggcgtctggtcgacgtgcagtac
gagcgcaacgactacgacctgcaccgcgggacgtttcgcgtgcgcggggacgtgctggag
atcatcccggcctacgagcacgagcaggccctgcgcctggaattcttcggagacgagatc
gacgggatctacgagaccgatccgctgaccggcgagatcctgtcccgggtccagaagacg
gtcatctacccggccagtcactatgtctcggaccgggacaatctggtgcgggccatggcc
gacatccgcgacgagctgcggcttcgtttgcagtattttcaggacaacaacatgctggtt
gaggcccagcgcctggagcaaaagacccagcttgatctggagatgatcgaggagcttggc
tactgcaacggcatcgaaaattattccctgcacctggacggccgcaggaccgggcagccg
ccgtccacgctcatcgactattttcccaaagatttcctgctgttcatggacgaatcgcac
atctccgtgtcccaggtcggcgccatgttcaagggagaccgctcgcgcaagcagaccctg
gtcgattacggattccgcctgccctcggccctggacaatcggcctctgaacttcgaggaa
tttctggagcgcatcggcaccacggtctttgtctcggccacccccgccccctgggagctg
gagcgggctcagggcgtggtggtggagcagatcatccggcccacgggcctggttgacccc
cagatcgaggtcgtgcccacggcgggacagatggatcacctcatggcgcagtgcctggcg
cgcatcgccgtggatgagcgggtcatggtcacgactctgaccaagcgcatggccgaggat
ttgaccgagttcctgcaggcccggggcgtgcgcgcccgctatctgcattcggacatcgac
accctggaacgggtggccatcatccaggccctgcgcgccggggagttcgacgtgctggtc
ggcatcaacctgctgcgcgaaggccttgatattccggaagtctctctggtagccatgctt
gatgccgacaaggaggggttcctgcgttcgacccgctccctgatccagactttcggccgg
gccgcgcgcaacgtgaagggcaaggtcctgctttacgccgacaccgtgacccgctccatg
gccgaggccatgggcgagacgcagcggcgcagggagcggcagaccctctataacgaggag
cacggcatcacgccgcagtccatccgcaagacttcggagaacacgctgtacgacctgcac
cgcgagatcaaggagcaggaacgggcggcggagcggacggcggactacgatcccggcccc
gagaacgcggccaaggaagtggcccgcttgagccgcgaaatgcgcaaggcggcggaaatg
cttgaattcgaggaggcggcccgtatccgggaccggatcaagaccctggaaaaacgctat
ggtctggacggttccagggcgacacgatcatga
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integrated database retrieval system
