Desulfomicrobium baculatum: Dbac_2469
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Entry
Dbac_2469 CDS
T00963
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dba
Desulfomicrobium baculatum
Pathway
dba03420
Nucleotide excision repair
dba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dbac_2469
03430 Mismatch repair
Dbac_2469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dba03400
]
Dbac_2469
Enzymes [BR:
dba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dbac_2469
DNA repair and recombination proteins [BR:
dba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dbac_2469
MMR (mismatch excision repair)
Other MMR factors
Dbac_2469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
RecR_HhH
HHH
DUF3223
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACU90548
UniProt:
C7LRP0
LinkDB
All DBs
Position
2833721..2835895
Genome browser
AA seq
724 aa
AA seq
DB search
MRIDYQNDLNPAQYEAATTLEGPVLVIAGAGSGKTRTVVYRLARLVESGVSPAEILLLTF
TRKASSEMLHRAGGLLGHQGLGHVRGGTFHGFAYSLLKQHAGLLGFERGATVMDRSDAEE
ILSQAKDRLKIGKGDRKFPKRATIIGLYSKSRNKELSLEQVLRQEAYHLGSYEDDLRRLL
EEYERIKQECGLLDYDDLLFLLERLLTEHPQVREAVTSSISHIMVDEYQDTNLVQARLVG
LLTKPGDTSPNVMAVGDDAQSIYAFRGANVKNILDFPKTFPGTKLIKLEQNYRSTQPILE
LTNAILDGFREKFAKRLFSERTDSRLPEHVLPFSDRSQARLVAAKVVELSRTYALDQIAV
LFRAGYQSYHVEVELNKIGLGFRKYGGIKFSEAAHIKDVLACLRLAQNTSDIPAWQRILG
NVPGIGPKSAQKIHHAAMINDQAFIKAQRAKRPALDDLLRVLDTLRTQVMRPSTAITFVL
EYYLPVLREKFPDDYPRREAGLEELVQISLSYDDTASFLGDLSLDSPDAEEERGQAVTLS
TVHSAKGLEWDAVLVIDLVEDRFPSRHAMNDSDDFEEERRLMYVACTRARDSLILFSPEA
LYSRELSATTPARVSPFLQDIPAHLLSRYREQFTGGVGLQTLPTPRRTSESTSAHISRPG
PGEDFEAPAPRPASSTQTPVQGTYCRHKIFGRGKVVQRVEPNKYKINFPGFGLKLIIEDF
VELE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgactatcagaacgacttgaatcccgcccagtacgaggccgcaaccaccctt
gaaggacccgtgctggtcatcgccggagccggctcgggcaagacccgcaccgtggtctac
cgcctggccaggctagttgaatccggcgtatccccggccgagatcctgcttttgaccttc
acccgcaaggcctcctcggagatgctgcaccgcgcgggaggcctgctggggcatcagggt
ctgggacacgtgcgcggcggcaccttccacggcttcgcctattccctgctcaagcagcat
gcgggcctgctgggcttcgagcgcggggccacggttatggaccgctccgatgcggaagag
atactcagtcaggccaaggatcgcctgaagatcggcaagggcgaccgcaaatttcccaaa
agggccacgatcatcgggctctacagcaaaagccgcaacaaggagctctccctggagcag
gtgctgcgccaggaagcctatcacctgggctcctacgaggacgacctgcgccgactgctc
gaagaatacgagcgcatcaagcaggagtgcggactcctcgattacgacgacctgcttttt
ctgctggaacgcctgctgaccgagcatccgcaggtccgcgaagccgtgacctcgtccatc
tcccacatcatggtcgacgagtaccaggacaccaacctcgtgcaggcgcggctggtcggc
cttctgaccaagcccggcgacacgagccccaatgtcatggccgtgggcgacgacgcccag
tcgatctacgcctttcgcggcgccaacgtgaaaaacatccttgattttcccaagaccttt
cccggcacaaagctcatcaagcttgaacagaactaccgctcaacccagccaatcctggaa
ttgaccaacgccattctggacggtttccgcgagaagttcgccaaacgcctcttttccgag
cgcacggactcgcgtctgccggagcatgtgctgcccttctcggaccgcagccaggcccgc
ctggtcgcggccaaggtggtggaactgtcccgcacctatgccctggaccagatcgcggtc
ctgttccgggccggatatcaatcctaccatgtggaagtggagctgaacaagatcgggctt
ggctttcgcaaatacggcgggatcaaattctccgaagccgcgcacataaaagatgtcctg
gcctgcctgcgccttgcccagaacacgtcggacatcccggcctggcagcgcatcctcggc
aatgtgcctggcatcggccccaagagcgcacaaaaaatccatcacgcggccatgatcaac
gatcaagccttcatcaaggcccagcgcgccaagcggccggctctcgacgacctcttgcgc
gtgctcgataccctgcgcacccaggtcatgcggccgtccacggccatcaccttcgtgctc
gaatactacctgcccgtgctgcgcgaaaaattccccgacgactacccgcgccgcgaagcg
ggcctcgaagagctggtccagatctccctcagctatgacgataccgcctcctttctgggc
gacctgagcctggacagccccgatgccgaggaggagcgcggccaggccgtgaccctgtcc
acggtgcattcggccaaaggtttggagtgggacgcggtgctggtcatcgatctggtggag
gaccgcttcccgtcccgccacgccatgaacgacagcgacgacttcgaggaagagcgccgc
ctcatgtacgtggcctgcacccgcgcccgcgacagcctgatccttttctcccccgaggcc
ctctacagccgcgaactctccgccaccaccccggcccgagtcagccctttcctgcaggac
atccccgcccatctgctgagccgctaccgcgagcagttcacgggcggcgtgggcctgcaa
accctgcccacgccccgacgcacgtcggagagcacgtcggcccatatctcccgcccggga
ccgggcgaagatttcgaggccccggcgccaaggcccgcatccagcacccagaccccggtg
cagggcacctactgccggcacaagatcttcggccgcggcaaggtggtccagcgcgtggaa
ccgaacaagtacaagatcaacttccccggattcgggctgaagctcatcatcgaggatttc
gtggaactggaatag
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