Desulfomicrobium baculatum: Dbac_2741
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Entry
Dbac_2741 CDS
T00963
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dba
Desulfomicrobium baculatum
Brite
KEGG Orthology (KO) [BR:
dba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dba03032
]
Dbac_2741
03400 DNA repair and recombination proteins [BR:
dba03400
]
Dbac_2741
Enzymes [BR:
dba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Dbac_2741
DNA replication proteins [BR:
dba03032
]
Prokaryotic type
DNA Topoisomerases
Dbac_2741
DNA repair and recombination proteins [BR:
dba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Dbac_2741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Lar_restr_allev
Zn_ribbon_PADR1
Motif
Other DBs
NCBI-ProteinID:
ACU90817
UniProt:
C7LU19
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All DBs
Position
3129233..3131473
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AA seq
746 aa
AA seq
DB search
MGKDLIIVESPAKIKTIKKFLGGGYEVEASVGHVRDLPTKTLGVDEGNDFAPDYQIIPGK
AKVVSKLKSAAKAADTVYLAPDPDREGEAIAWHVAEVIRTSNPNVKRIQFNEITAKAVKE
ALANPTELRKPLFDSQQARRILDRLVGYKISPLLWKKVKRGLSAGRVQSVALRLIVDRER
ERQAFVSEEYWVFKITVQGETPPPFDADLWKVDGEKPVIGDEKTALALESRVDGQSYVVR
DIVEKERQRHPRPPFITSTLQQDASNKLGFNAKRTMSVAQRLYEGVELGERGTTALITYM
RTDSVRISDEAKDGAREWITRTLGPEFYPKEPRVYKSKGSAQDAHEAIRPVDPSLTPDSI
KNNLPPEQYKLYRLIWERFMASQMASARFWDTVATIESGPAQWRAKGERLVFPGFLQIWP
QSSDNQSALLPKLVTGQELRLEKLHKEQKFTQPPARFSEASLVHKLEELGIGRPSTYAAI
ISTLTERDYVHIEEKHFQPTDLGVIVCDLLVEHFAHLMDAGFTARMEESLDHVAEGETDW
VALLRDFTLDFNPTLDKARENMTQVKAGMDTGLSCPQCEDGRLVVKFGKNGTFLGCANYP
ACSFTSNYIRNNAGEIELVKEEAPEELGPCPKCEDGRLVVKKTKTGGRFVACSNYPACRH
TKSVSTGVACPKDGCDGELVEKTSRRGKPFYSCSKYPKCDYAVWDFPVAKPCPLCESKIL
VRKETKARGAHLACPVKDCGYWEKLD
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggacttaatcatcgtcgaatcacccgccaaaatcaaaaccatcaaaaagttt
ctgggcggcgggtatgaagtggaagcatccgtgggacacgtgcgtgacctgccgaccaaa
accctgggcgtggacgagggcaatgactttgccccggactatcagatcatccccggcaag
gccaaggtcgtcagcaaactcaaatccgcggccaaggctgcggacacggtctatctggca
cccgacccggaccgtgaaggggaggccatcgcttggcacgtggccgaagtcatccggact
tccaatccgaatgtgaaacgcattcagttcaacgagatcacggccaaggcggtcaaagaa
gccttggccaaccccacggaactgcgcaagcccctcttcgattcccagcaggccagacgc
attctggatcgcctggtgggctacaaaatttctccgctgctctggaaaaaggtcaaacgc
ggcctgtccgccggccgggtccaatccgtggccctgcgtctcatcgtggaccgcgaacgt
gaacgccaggcctttgtttccgaagaatactgggttttcaagatcacggtccagggcgag
acccctccgccctttgacgccgacctgtggaaagtggacggggaaaaacccgtcatcggc
gacgaaaagacggccctggccctggaaagccgcgtcgacggacagtcttatgtggtacgg
gacatcgtcgagaaggaacgccagcgccaccctcgtccgccgttcatcacctccaccctg
cagcaggatgccagcaacaagctcggcttcaacgccaaacggaccatgtccgtggctcag
cgcctctacgagggcgtagagcttggcgaacgcggaaccacggcactcatcacctacatg
cgtaccgactcggtgcgcatttctgatgaggccaaggacggcgcccgcgagtggatcacc
cgcaccctggggccggaattctatcccaaggagccccgggtctacaaaagcaagggcagc
gcccaggacgcgcacgaagccattcgccccgtcgatccgagcctgactcccgattccatc
aaaaacaacctgccgcccgaacagtacaagctctaccggctcatctgggagcgcttcatg
gcctcgcagatggcttccgcccgcttctgggataccgtggccaccattgaaagcggcccg
gcccaatggcgcgccaaaggcgagagactcgtcttccccggttttctgcagatctggccg
caatcctcggacaaccagagcgccttgctgccgaaacttgtgaccggacaggaactgcgt
ctggagaagctgcacaaggaacagaaattcacccagcccccggctcgcttctcggaagcg
tccctggtgcacaagctcgaagagctgggcatcggccgaccctcgacctatgcggccatc
atctccaccctgacagagcgcgactacgtccacatcgaggaaaaacatttccagcccacg
gacctgggcgtcattgtctgcgaccttctggtggaacatttcgcccacctcatggacgcc
ggcttcacggcgcgcatggaagaaagcctcgaccatgtcgccgagggcgaaaccgactgg
gtcgccctgctccgggatttcaccctggacttcaacccgaccctggacaaggcgcgggaa
aacatgacccaggtcaaggccggcatggacacgggactgtcctgtccccaatgcgaggat
ggcaggcttgtggtcaaattcggcaagaacggaacttttctgggctgcgccaactatccg
gcctgttcctttaccagcaactacatccgcaacaacgccggggaaatcgagctggtcaag
gaagaagcgcccgaagagctcgggccctgccccaaatgcgaagacggtcggttggtggtc
aaaaagaccaagaccggcggcagatttgtagcctgctccaattatcccgcctgccgccac
accaaatccgtgagtaccggcgtggcctgccccaaggacggctgcgacggcgaactggtc
gaaaaaaccagccgccgcgggaagcccttctattcctgcagcaaatatcccaaatgcgat
tacgcggtctgggatttccccgtggccaagccctgtccgctgtgcgaatcaaaaatcctg
gtgcgcaaagagaccaaggccaggggagcgcacctggcctgtccggtcaaggattgcgga
tactgggaaaaattggactag
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