| Entry |
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| Name |
(GenBank) DNA-directed RNA polymerase, beta subunit
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| KO |
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| Organism |
dba Desulfomicrobium baculatum
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:dba00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dbac_2781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:dba03021]
Dbac_2781
03400 DNA repair and recombination proteins [BR:dba03400]
Dbac_2781
Enzymes [BR:dba01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dbac_2781
Transcription machinery [BR:dba03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dbac_2781
DNA repair and recombination proteins [BR:dba03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dbac_2781
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(3160678..3164769)
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| AA seq |
1363 aa
MNKLIKKFGRIKDSIDIPHLLSLQLDSYNKFLQTDVPPSMRTDIGLEGVFRSVFPIHDFN
KTATLEYVSYDIGKPKYDVDECIAKGLTFEAPLRIKVRLAVYDVDEASGSRTIHDIKEQD
IYFGTIPLITQKGTFLINGTERVIVNQLQRSPGIIFEHDSGKTHSSRKILYSCRIIPMRG
SWLDFDFDHKDILYVRIDRRRKMPATILLKAMGMTSEDILDYYYAKETFRLEGTSVLRRV
EEYNFRKELAHSDVVAPDGTVIVAAGKALTKGMWKRMIKAGIEYYEVRPDTLETEYAAKD
IVDPGTGEVILRAGDPFTAGAVEKCLAAGITEMGAIFSTGAEASACLRDTLAMDKCEDLE
SAQIDIYKRLRPSSPPTAEISASFFDNLFRNADYYDLSPVGRYKLNSRLNLSLPIDHRTL
SNDDIFRSVKKLIQLKDSHGPADDIDHLGNRRVRPVGELVENQYRIGLVRMERAIKERMS
LQEVATLMPHDLVNPKPVTAVLKEFFGTSQLSQFMDQTNPLSEVTHKRRLSALGPGGLTR
ERAGFEVRDVHLSHYGRICPIETPEGPNIGLIVSLTTHGLVNDYGFIETPYRVVKDAIVT
DEIQYMEASTESGHIIAQANALFGDDRQFINAQVEARVEGEFAIVPREEVTLMDISPGQI
VSISSALIPFLEHDDANRALMGSNMQRQSVPLLVTEEPLIGTGIEGKVAQDSGSCLLAEG
DGEIMYVDADRVIVAYSDDLYPEAGGVRFYEVQKYHKSNQNSCFGQKPRVKIGDKVKKGA
VLADGPAIHNGELALGKNLLVAFMPWCGYNYEDSILISERVVKEDVYTSIHIEEFDVFAR
DTKLGPEEVTRDIPNVGEEMLRNLDESGIIRIGARVKPDDILVGKITPKGETQLTPEERL
LRAIFGDKARDVKNTSLKVPPGIEGTVIDVKVFNRRSGDKDERTHLIENYELERIDVRER
QHAAALTETTRRKIWDVCKGKSVAKTIMGKRKGEVLLEANQPIKEDVFAEIPLKKLVGAF
AAKDVNEAVKVQLDYFDLQLKFVKDVYESKRGKVTEGDDLPPGVIKMAKVYVAVKRKLNV
GDKMAGRHGNKGVVSNILPEEDMPFFADGTSMDVVLNPLGVPSRMNIGQIMETHLGWAAK
SLGQQIAAMVDEGVAKVRSEIKDIFDSPETSALLDTMTDDEVIEAARDLNRGIIMKTPVF
DGADESEIWALLKRAGLPEDGKALLFDGRTGVPFHNRVTVGYMYYLKLHHLVDEKIHARS
TGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAAYLLQEFLTVKSDDVNGRVKMYEK
IVKGSNFLESGMPESFNVLVKEMMALGLEVTLLEDDKKRPRKR |
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| NT seq |
4092 nt +upstreamnt +downstreamnt
atgaacaaactgatcaagaaattcggacgaattaaagattccattgatatccctcatctt
ttaagccttcagcttgattcgtataataaatttctgcagactgatgttccgcccagcatg
cgcacggatatcggtctcgaaggcgtttttcgttctgtttttccgattcatgatttcaat
aagacggccaccttggaatacgtcagttacgatatcggcaagcccaaatacgatgtcgat
gagtgcatcgccaagggtttaacctttgaagctcccttgcgcatcaaggtgcgtctcgcc
gtgtacgacgtcgatgaggcgtccggcagtcgcaccatccatgacatcaaggagcaagac
atatatttcggaacgatcccgctcattacccagaagggaacgtttttgatcaatggcacc
gagcgtgtcattgttaaccagctgcagcgatcgcccggcatcatctttgagcacgattcc
ggcaagacgcattcaagccgtaaaatcctgtacagctgccgcataattcccatgcgcggg
tcctggctggattttgatttcgaccacaaagacatcctttacgtgcgcatcgaccgccgc
cgcaaaatgcccgccacgattttgctcaaggccatgggcatgaccagcgaggatattctc
gactattactacgccaaagagacttttcgccttgaaggcacctctgtcctgcggcgcgtg
gaagagtacaacttccgcaaggaactggctcattccgatgtcgtcgctcccgacggaacc
gtgattgtcgctgccggcaaggccctgaccaagggcatgtggaagcggatgatcaaggcc
gggatcgagtattacgaggttcgccccgatacgctcgagacggaatatgccgccaaggac
attgtcgaccccgggaccggagaggtcatcctgcgcgcaggagatccctttaccgccgga
gccgtggaaaaatgcctggctgcgggcatcaccgaaatgggtgcgatattctctactggt
gccgaggcctccgcgtgtctgcgcgataccctggccatggacaagtgcgaagatttggaa
agcgcgcagatcgacatctacaagcgtctgcgtcccagttctccgcccacagccgagatt
tcagccagcttcttcgacaatttgttcaggaatgccgattattacgatctctctcctgtc
ggacgctacaagctcaattcccgtttgaacctgagcctgcccattgatcaccgcacgttg
tccaacgacgacatcttccggtcggtcaagaagctcattcagctcaaggactctcacggt
cccgccgatgacatcgatcatcttggcaaccgtcgtgtcaggcccgtcggcgagttggtg
gagaatcagtaccgcatcggcctggtgcgcatggagcgcgcaatcaaggaacgcatgagc
ctgcaggaagtcgcaacgctgatgccgcacgacctggtcaatcccaagccggtcaccgcc
gtgctaaaggaatttttcggcacatcgcagctgtcgcagttcatggaccagaccaacccc
ttgtccgaggttacgcacaagcggcgtctgtccgctctcggacccggcggcctgactcgt
gaacgtgcagggttcgaggtgcgcgacgttcatcttagccattacggacgtatctgtccc
attgaaactcccgaaggcccgaacatcggccttatcgtttctctgaccacgcacgggctg
gtcaacgattacggtttcatcgagaccccgtatcgcgtggtcaaggatgcgatcgtcacc
gatgaaatccagtacatggaagcgtccaccgaaagcgggcacatcatcgcccaggccaat
gctcttttcggcgatgaccgtcagttcatcaacgctcaggtcgaggcccgggtcgagggc
gagttcgccatcgtgccacgcgaagaagtgacgctcatggacatttctccggggcagatc
gtgtccatttcttccgcgctgattccctttctggagcacgatgacgccaaccgcgcgctc
atgggttcgaacatgcagcgtcagtcggtcccgcttctggtgaccgaggagccgctgatc
ggtaccggcatcgagggcaaggtcgcccaggattccggaagctgccttttggccgagggt
gacggcgagatcatgtacgttgacgcggaccgggtcattgtcgcctattctgacgacctg
taccccgaagccggcggcgtgcgtttttacgaggtgcagaaataccacaagtccaaccag
aacagctgctttggccagaaacctcgggtcaagatcggggacaaggtcaagaagggcgcg
gtcctggcggatggcccggccatccataacggagagctggccctgggcaagaacctgctt
gtggccttcatgccctggtgtggttacaactacgaagactccatcctgatttcagagcgg
gtcgtgaaagaagatgtctacacctccatccacatcgaggagttcgacgtattcgcccgc
gacaccaagctcggacccgaggaagtcacccgcgacattcccaacgtcggcgaagaaatg
ctgcgcaatctcgacgagagcggcattattcgcatcggcgctcgggttaagccggacgac
attctggtcggcaagatcacgcccaagggcgagacgcagctgacaccggaagagcggctc
ctgcgggccatcttcggagacaaggcgcgtgacgtgaagaatacgtccctcaaggttccg
ccgggaatcgagggcacggtcatcgacgtcaaggttttcaaccgccgctccggagacaag
gacgagcgtacgcacctgatcgagaattacgagcttgaacgcatcgacgtgcgtgaaaga
cagcacgccgcagccctgaccgaaaccacccggcgcaagatctgggatgtctgcaagggt
aaaagcgttgccaagaccatcatgggcaagcgcaagggagaagtgctccttgaggccaac
cagcccataaaagaagatgtttttgctgaaattccgctcaagaagcttgtcggtgctttt
gctgccaaggacgtcaacgaagccgtgaaggtgcagctcgactatttcgatctgcagctc
aaattcgtcaaggacgtgtatgaaagcaagcgcggcaaggtcaccgaaggggacgatctg
cctccgggcgtcatcaaaatggcgaaggtctatgttgccgtgaagcgtaagctcaatgtc
ggcgataagatggccggtcgtcacggcaacaagggtgttgtttccaacatcctgcccgaa
gaggacatgccgttctttgctgacggaacgtccatggacgtggttctgaatcctctgggc
gtaccttcgcgtatgaacatcggccagatcatggagacgcatttgggttgggcggcaaag
tcccttggtcagcagatcgcggccatggtcgatgaaggcgtggccaaggtgcgcagcgaa
atcaaggacattttcgattcacccgagacttcggcgttgctggataccatgacggatgac
gaagtcattgaagccgcccgggatctcaatcgcggcataatcatgaagactcccgttttt
gacggcgccgacgagagcgagatctgggcgctgctcaagagagcagggctgcccgaagac
ggcaaggcgctgctctttgacggtcgtaccggcgttccgttccacaaccgtgtcacggtg
ggctacatgtattacctgaagctgcaccatctggttgacgagaaaattcatgcccgctcg
acgggtccttactccctggtcacccagcagcccctcggcggcaaggcccagttcggcgga
cagcgtctcggtgaaatggaagtctgggccctggaagcatacggcgccgcttatctgctg
caggagtttttgacggtcaaatccgatgatgtgaacggtcgtgtgaagatgtatgaaaag
attgtgaagggatccaatttcctcgaaagcggaatgcccgaatcattcaacgtattggtc
aaggaaatgatggcgctgggtcttgaagtcacccttttggaagacgacaagaagcgcccg
aggaaaagatga |
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