Desulfomicrobium baculatum: Dbac_3021
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Entry
Dbac_3021 CDS
T00963
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dba
Desulfomicrobium baculatum
Brite
KEGG Orthology (KO) [BR:
dba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dba03016
]
Dbac_3021
Enzymes [BR:
dba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Dbac_3021
Transfer RNA biogenesis [BR:
dba03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Dbac_3021
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ACU91096
UniProt:
C7LW60
LinkDB
All DBs
Position
3419123..3421165
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AA seq
680 aa
AA seq
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MSTSLSLQPGCIMEFLQDNQPVTAWVLDVQGPRLRVFTSGQRELKLPLSRALPWLGPQCP
AGSSRQEMLDLLRTHNGRRERLAESVDALEIWDLAQGEVDEAGIDWFASLVFEDASPDQL
AALGRKLLQTKTHFKFSPPQFEIYPLETVERRQEEMRKAQERERLVGFGQDFLRGLWDIF
CKRKSALPQPDQEQSERIRELLMTRLCSPDDRDSDALWKTMSQGLPEDPHLPLFLAQAWG
IVPPHFNFHLCRAQYYWEPDWAAAHAEAVTDLQERVLATRTEPSVSIVTIDSASTQDIDD
GFALTRDENGFTLHLALACPCLGWEFGSPLDKAVLHRFTSLYLPEGTSHMLPEALGKDFF
SLCAGQERPALVISFDLDPDGALRSFAPQITWIRIEANLTYTGVENEIEAGAPGMLHHAR
DLATLLRQARIREHAVIMDQPDPRMVLCNDPVNPEVTVVQSESTPEAQKIVSEFMILANK
AMGSWARETDTALLFRTQNITLPAESAGVWTDPTDIYRIINNMGPSILECEPRRHATIGA
KAYAPVTSPLRRYSDFINMAQILAKLTGQGRLLDKAALESLLPLLSSRAELVGQVQRMRP
RYWKYEYFRQNHKKIRWSGIIVDPGSHLVTISLPDLQLFLKAPRKIFGDKIRLGQRFSIR
IGKVDPLNNEIKIVEAWEEE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgtccacctctctctccctgcagcccgggtgcatcatggaattcctgcaggacaaccag
cccgtcacggcctgggtcctggacgtccagggcccgcgcctgcgggttttcacctccgga
cagcgcgagctcaagctccccctgtccagagccctgccctggcttggcccccaatgtccg
gcgggcagcagccgccaggaaatgctcgacctgctgcgcacgcacaacggccgccgggaa
cgcctggccgaatccgttgacgcgctggagatctgggacctggcccaaggcgaagtggac
gaagcaggcattgactggttcgcgagcctggtcttcgaagacgcgagtcccgatcagctc
gcggccctggggcgcaagctcctgcagaccaagacccatttcaaattctccccgccccag
ttcgagatatatccgctggagaccgtggaacgccgccaggaagagatgcgcaaggctcag
gagcgcgagcgtctggtcggcttcggccaggacttcctgcgcgggctgtgggatatcttc
tgcaagcgcaagagcgccctgccccagcccgaccaagagcagtcggagcgcatccgcgaa
ctgctcatgacccgcttgtgcagccccgacgaccgggattcggacgccctgtggaagacc
atgagtcaaggcctgccggaagacccgcacctgcctctgttcctggcccaggcctggggc
atcgtgccgccgcatttcaacttccacctctgccgcgcccaatattactgggagccggac
tgggccgcggcccacgccgaagccgtaactgacttgcaggagcgggttctggctacgcgc
accgagccctccgtcagcatcgtgaccattgattccgccagcacccaggacatcgacgac
ggcttcgcgctgacgcgtgacgaaaacgggttcacgctgcatctggccctggcctgcccc
tgtctgggctgggaattcggcagtcccctggacaaggcggtgctgcaccgcttcacctcc
ctctatctgcccgaaggcaccagccacatgctgcccgaggccctgggcaaggatttcttc
agcctctgcgccggacaagagcgtccggccctggtcatctcctttgatctggacccggac
ggagccttgcgctcctttgctccgcaaatcacctggatccgcatagaggccaatctgacc
tacacgggcgtggaaaacgagatcgaggcaggcgctcccggcatgctgcatcacgcccgc
gacctggccaccctgctgcggcaggcgcgcattcgcgagcacgcggtgatcatggaccag
cccgacccgcgcatggtcctctgcaatgacccggtcaacccggaggttacggtcgtccag
tccgaatccacgcccgaagcgcaaaaaatcgtgtccgagttcatgatcctggccaacaag
gccatgggttcctgggctcgggaaacagacacggccctgcttttcagaacccagaacatc
acgctgcccgccgaaagcgccggcgtctggaccgatcccacggacatctaccgcatcatc
aacaacatgggcccctccatcctcgaatgcgaacccaggcgccacgccaccatcggggcc
aaggcctatgcgccggtgacctcgccgcttcggcgctattccgacttcatcaacatggcc
cagatcctggccaagctgaccgggcagggacgattgctggacaaggcggcgcttgagagc
ctgctcccgctcttgtccagccgggccgaactggtcggacaggtgcagcgcatgcggccg
cgatactggaaatacgaatatttcagacaaaatcacaaaaagatccgctggtccgggatc
atcgtcgatcccggctcacacctggtgaccatttcgctgcctgacctgcagctctttctg
aaggccccgcgcaagatctttggcgacaaaatccggctcggccagcggttttccatcaga
atcggcaaggtcgatcccctgaacaacgagatcaagatcgtcgaggcctgggaagaggaa
tga
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