Desulfomicrobium baculatum: Dbac_3345
Help
Entry
Dbac_3345 CDS
T00963
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dba
Desulfomicrobium baculatum
Pathway
dba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dbac_3345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dba03400
]
Dbac_3345
Enzymes [BR:
dba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Dbac_3345
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Dbac_3345
DNA repair and recombination proteins [BR:
dba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Dbac_3345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Zn_ribbon_IS1595
DUF7351
HMBD
DUF7575
Zn_ribbon_TFIIB
RNHCP
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ACU91417
UniProt:
C7LPA7
LinkDB
All DBs
Position
complement(3777917..3778729)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETIARGLHTLVQGRRIREVLHFTPSVLRAGNPGSLPGRTITYVSRRAKLLLVH
LDQGECLAFHLKMTGRVWVASPGQDLPKHTHLVCELEGRDRLIFEDTRRFGFFGIYGPQD
IEAWSFYQNLGPEPLQSTAEDLALRLGARRAGVKSLLLNQTVLAGIGNIYADESLFAARI
HPASLAANIPLAKRVQLCSELQRILLEAIAAGGSTISDYRNAYGKSGIFQDSFEVYGKKG
QPCPACGRALKAEQIAGRTSTHCPRCQKLY
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgaaaccatcgcccgcggcctgcacaccctggttcaggga
cgccgcatccgcgaagtcctccattttacgccaagcgttctgcgggccgggaacccaggc
tccctgccgggcaggaccatcacctatgtctcgcgccgggccaagctcctcctggtccat
ctggaccagggcgaatgcctggccttccacctcaaaatgacagggcgggtctgggtcgca
agcccgggccaggacctgcccaaacacacgcatctggtctgcgagcttgaaggcagggac
cgcttgatcttcgaagacacgcggcgtttcggattcttcggaatatatgggccgcaagat
attgaggcctggagcttttatcaaaacctcggccccgaaccgctgcagagcacggccgag
gacctggcactgcgcctcggtgcgcgccgtgcaggggtgaagagcctgcttctcaatcag
acagtcctggccggaatcggcaacatctacgccgacgaatccctcttcgcggcccgtatc
catccggccagcctggccgcgaacatacctcttgcaaaacgcgtccagctctgctcggag
ctgcagcgcatcctgctcgaagccatcgccgctggcggcagcaccatcagcgactaccgc
aacgcctatggcaaaagcggcatcttccaggacagtttcgaggtctacggcaagaagggc
cagccctgccccgcctgcggcagggcgctgaaggcagagcagatcgcgggaaggacgtcg
acgcattgtccgcgttgccagaaattgtattag
DBGET
integrated database retrieval system
