Metallumcola ferriviriculae: MFMK1_000087
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Entry
MFMK1_000087 CDS
T10258
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dbc Metallumcola ferriviriculae
Brite
KEGG Orthology (KO) [BR:
dbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dbc03016
]
MFMK1_000087 (truA)
Enzymes [BR:
dbc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
MFMK1_000087 (truA)
Transfer RNA biogenesis [BR:
dbc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MFMK1_000087 (truA)
Prokaryotic type
MFMK1_000087 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
WRO20329
UniProt:
A0AAU0UJC5
LinkDB
All DBs
Position
complement(95839..96582)
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AA seq
247 aa
AA seq
DB search
MPYISLTLQYDGTDFNGWQVQTKQPHSRTVQYTVEQALKLLTKEDIRVEAAGRTDAGVHA
RGQVISFWTNAAIPVDRYPRALNGILPRDVLVSDSGNVDINFHARFSARQKTYIYRVSSG
TDLDIFWRRYSFHFLRSLDIDDMKRAAEHLRGRHDFRSFCASGSSITDFIREIKDCQVTD
DGDMIEVSITADGFLYNMVRIIVGTMLEVGTGKKMVTDIPKIIAARNRGAAGATAPACGL
TLERVIY
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgccttatattagtctaactctacaatatgatggaaccgattttaacggctggcaggtg
cagaccaagcaaccccacagccgcactgtacagtatacggtggagcaagctttaaaattg
ctcactaaggaagatatcagggtggaagcagcgggacgcaccgatgccggggtgcatgct
cggggccaggtaattagcttttggacaaatgctgcgataccggtggacagatatcctagg
gctcttaacggcatattaccccgagatgttttggtgagtgacagtggtaatgtagacatt
aattttcatgcccgttttagcgccagacaaaaaacctatatttatcgggtcagcagcggg
acggatcttgatatattttggcgccgctatagcttccattttttgcggtctttagatatt
gacgatatgaaacgggccgcagaacatttgcgtggtcggcacgattttcgttccttttgt
gccagtggcagtagtataactgactttattcgtgagataaaggactgtcaggtgaccgat
gatggcgatatgattgaggtgagcattactgctgatggtttcttatataatatggttaga
ataattgtgggtactatgctggaagtgggaacgggaaaaaagatggtgactgatataccc
aaaataattgccgcccggaaccgcggcgcagccggtgctactgctccggcttgcggtctg
acattggagcgagtgatatactag
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