Metallumcola ferriviriculae: MFMK1_000128
Help
Entry
MFMK1_000128 CDS
T10258
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dbc Metallumcola ferriviriculae
Pathway
dbc03020
RNA polymerase
Brite
Enzymes [BR:
dbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MFMK1_000128 (rpoC)
Transcription machinery [BR:
dbc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MFMK1_000128 (rpoC)
DNA repair and recombination proteins [BR:
dbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MFMK1_000128 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WRO20370
UniProt:
A0AAU0UJE4
LinkDB
All DBs
Position
complement(119657..123154)
Genome browser
AA seq
1165 aa
AA seq
DB search
MLDVNNFDGMRIGLASPEQIRAWSSGEVKKPETINYRTLKPEREGLFCEKIFGPTKDWEC
HCGKYKRVRYKGIICDRCGVEVTRSKVRRERLGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRSLEKVLYFVAYVVVDPEETPLMQKQLLTETEYREYRDKYGNKFKAGMGAESVKALLE
KIDLEELTAALRQELKEVSGQRRVRAIRRLEVAEAFKNSGNRPDWMILDVIPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVRNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPEMEMHQCGLPKE
MALELFKPFVMKRLVDKGYAHNIKSSKRLVERLKNEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPVLVEGRALQIHPLVCTAYNADFDGDQMAVHVPLSAEAQSEARLLMLSSGNIL
NPKDGQPVATPTQDMVLGSYYLTITKDGAKGEGTIFGTFEEAKMAYETGAVDLHAKIKAR
IDGKLIETTPGRMIFNFEVPIPKELGYFNQDADKKALGQIVANCYRHLGLAATPKLLDGI
KRIGYHYSTKAGITIGVADIDVPTHKKEILAKTEAVVEDVERQYRRGLITDEERYQKVID
LWNNATETVTERLMDTLDKFNPIFMMATSGARGNVQQIRQLAGMRGLMADPSGRIIDLPI
KANFREGLTVLEYFISTHGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTEQS
IEAVQITDGSEVIENLDERLVGRTTAQDIIHPETGEVIVRANEEIMEEQADDIVRVGIKK
VDVRSILTCKTRYGVCAKCYGRNLATGKKVEIGESVGIIAAQSIGEPGTQLTMRTFHTGG
VAGDDITQGLPRVEELFEARKPKGQALIAEADGIVRFKEVKGRREVSIVDGDEVKSAQQA
PYGSRLKVRDGDSVEAGDELTEGSVNPHDLLKVKGVRKVQNYLLREVQRVYRLQGVNIND
KHIEVMIRQMLRKVKVEESGDTELLPGGTIDLFDLEEANREAVGKGGEPGSAKTVLLGIT
KASLATDSFLSAASFQETTRVLTEAAIKGKLDPLLGLKENVIIGKLIPAGTGMSRYRSVE
LLPANAGEDMLSKDFFKETNLVDTP
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtgaacaactttgatgggatgcggattggtttagcttcgccggagcaaatt
agggcttggtccagtggtgaagtaaagaaaccggaaaccattaactaccggacgttaaaa
cccgaaagggaaggtctcttttgtgaaaaaatcttcggcccaactaaagattgggagtgc
cactgcggtaaatataagagggtacgttacaagggtattatttgtgaccgctgcggcgtt
gaggtaacccgttctaaagtccgtcgcgagcgtctgggacatattgaattggcggcgcct
gtctctcatatttggtattttaaaggaatacctagtcgcatggggctattgttggatatg
tcccctaggtccttggagaaggtgttatattttgtcgcctatgtcgttgtagaccctgaa
gaaacgccgttgatgcagaaacaacttttgacagaaacggaatatcgagaatatagggac
aagtatggtaataagtttaaagccggcatgggtgctgaatctgttaaggcgctcctggaa
aagatcgatctggaggaattgaccgcggcgttacgccaagagcttaaggaagtcagcgga
cagcgcagagtaagggcaatcagaaggttggaagttgcggaagcatttaaaaattcgggc
aatcgacctgactggatgattttagatgttattcctgttattccgccggagcttcgtccc
atggtgcagctggacggcggccgttttgccacctccgacctcaatgacctttaccgacgg
gtaattaatagaaacaatcgtttaaagcggctgttggacttaggcgcgccagatattatt
gttcgtaatgaaaaacgcatgctgcaagaggcagtggatgcattgattgacaatgggcgg
agagggagacccgttactggtccgggcaacaggcccttaaaatctctcagcgatatgctt
aagggtaagcaggggcgttttcgccagaaccttttgggcaaacgggtggattattcaggg
cgttctgtaattgttgtgggcccggaaatggaaatgcatcagtgcggtttaccaaaagag
atggctcttgaactgtttaaaccgtttgtgatgaagcgcttggttgataaaggatatgcc
cataacataaaaagttctaagcgtttggtagagcggttgaaaaacgaagtatgggatgtt
ctggaagaagtcattaaagagcacccggtgctgctaaaccgtgcgcctacccttcaccgt
ttgggcatccaggcgtttgaacctgtattggtagaagggcgggcattacaaatacatcct
ttggtatgtactgcttataatgccgactttgacggtgaccagatggcggttcacgtacct
ctttcagccgaagcgcaatctgaagcgagactgcttatgctttctagcggcaacatcctt
aatcccaaagatgggcagccggtggctacgccaacccaggatatggtgctgggcagctat
taccttaccattaccaaggatggggccaagggtgagggaacaatatttggtaccttcgaa
gaagcaaagatggcatacgaaacaggtgccgtggatttacatgcaaaaatcaaggcccgt
atcgatggtaagctgatagaaaccacaccagggcgaatgatttttaattttgaagttcct
attccaaaagaactgggatattttaatcaggatgcggataaaaaagcattgggtcaaata
gttgcaaactgttaccgccaccttggcttggctgctaccccgaaactgttggatgggatt
aaacggattggctatcactactctactaaggcgggcatcaccatcggcgttgctgatatt
gatgttcctacacataaaaaagaaattctggctaaaacagaggcagtggttgaagacgta
gaacgccagtaccggcgaggtcttattacagacgaagaacggtatcagaaggtgattgac
ctttggaataatgccactgaaacagtgacagagcggctgatggatacattggataagttc
aaccctatcttcatgatggcgacatcaggcgcccggggtaatgtacagcagattcgacag
ttagctggtatgcggggtttgatggcagacccctccggccgaattatcgacctgccaatt
aaggcgaacttccgggaaggattaacagtattggagtactttatttccactcacggagcc
agaaaaggtctggcggatactgcattaagaacggctgattcaggttacttaacacgacgg
ttggtagatgtcgctcaggatgtaattgttcgcgaggaagactgcggcactgaacaaagt
atagaagcggtgcaaattaccgatggcagtgaagtcattgagaatcttgatgagcgatta
gttggccgtactactgcccaagatataatacaccccgaaaccggtgaagtaattgtgcgt
gccaatgaagagattatggaagagcaggcggacgacatcgttcgggttggaattaaaaaa
gtggatgtgcggtctattctcacatgcaaaacaagatatggcgtttgcgctaaatgttac
ggtcgcaatctggctaccggtaaaaaagttgagattggtgaatcggtaggtattattgcg
gcgcaatcaatcggtgaaccgggtacgcagctaacgatgcgtacattccataccggtggt
gttgccggcgatgacattacccaaggtttgccaagggttgaagagttgtttgaagctcgt
aaaccaaaggggcaggcattaattgccgaagcggacggaattgtgcgcttcaaggaggtt
aaggggcgtcgcgaagtatccatcgtggatggagacgaagttaaatctgcacagcaggca
ccctacggctcgcgccttaaggtacgtgacggggattctgttgaagctggggatgagtta
accgaagggtcagtcaacccccatgacctcttgaaagtcaaaggggtccgcaaagtgcaa
aattacctcctgcgagaggtgcaaagggtatatcgcttgcagggcgttaacatcaatgat
aaacatatagaggttatgattaggcaaatgcttcgcaaggttaaggtggaagaatctggc
gatactgaattgctgccaggcggtaccattgacctgtttgatttggaagaagcgaaccga
gaagctgtgggtaaagggggagaaccaggatcagccaagactgtgctgctaggaattacc
aaggcgtccctggctacagactctttcctatccgcggcatctttccaggagactacccgg
gtactgactgaggcggccatcaaaggcaagctagacccgctgctggggcttaaagagaat
gttattattggtaaacttattccggcgggcacaggcatgtcccgttatcgcagtgtagaa
ttgctgcccgcgaatgccggggaggatatgctgtcaaaggatttttttaaggaaacaaat
cttgttgacacgccttag
DBGET
integrated database retrieval system
