Metallumcola ferriviriculae: MFMK1_000173
Help
Entry
MFMK1_000173 CDS
T10258
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dbc Metallumcola ferriviriculae
Pathway
dbc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dbc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MFMK1_000173 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dbc01007
]
MFMK1_000173 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dbc03016
]
MFMK1_000173 (lysS)
Enzymes [BR:
dbc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
MFMK1_000173 (lysS)
Amino acid related enzymes [BR:
dbc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
MFMK1_000173 (lysS)
Transfer RNA biogenesis [BR:
dbc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MFMK1_000173 (lysS)
Prokaryotic type
Other AARSs
MFMK1_000173 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
T4_neck-protein
Motif
Other DBs
NCBI-ProteinID:
WRO20405
UniProt:
A0AAU0UJS4
LinkDB
All DBs
Position
complement(164917..166386)
Genome browser
AA seq
489 aa
AA seq
DB search
MTEDVNELLQIRRDKLDQIKAMGFDPFGDKFLRQHYAAQISDDFEEYADKSVALAGRVMS
KREHGKASFAHVQDISGQIQFYIRKEDVGEETYELFKILDIGDIVGIGGTVFKTRRGEVT
VNVDSLVLLTKSLQPLPEKWHGLKDTDLRYRQRYIDLIVNPEVQKVFITRSNIIKAMRQY
LDKEGFLEVETPTMHAIAGGATARPFTTHHNALDIDLYMRIALELHLKRLLVGGLEKVYE
IGRVFRNEGISTKHNPEFTMIELYQAYADYHDMMKLTENLISFVAQETLGTQAITYQGTE
INLAPPWKRVTMLDAIKEHANVDFSSINTQDEVDKLIDKLDMELEKGTPKGKVINEVFEI
FVEPHLIQPTFIMDYPIEVSPLAKRKKEDPNFTSRFEAFIFARELANAFSELNDPIDQKE
RFLSQVKQRETGDDEAHMMDEDFVRALETGMPPAGGLGIGIDRLIMLLTNSPSIRDVILF
PTMRPREND
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgaagatgtcaatgaattattacagataagacgggacaagttggatcaaattaag
gcaatgggattcgatccctttggcgataaatttctgcgtcagcattatgctgctcaaatt
agtgatgattttgaggaatatgcggacaaatccgtggctcttgccggtagggttatgtcc
aagagggaacatggtaaggcaagctttgcgcatgttcaagatatttccggtcaaattcag
ttttacattcgcaaagaagatgtgggcgaagagacttatgaattgtttaagatcctggat
attggtgatattgtcggcatcgggggtacggtatttaaaacccgcaggggtgaggtaaca
gtcaacgttgacagcttggtacttttaactaaatctctacaacctttgccggaaaaatgg
cacggactgaaagatacggatttgcgttaccgccaaagatatatagacctaattgttaat
ccagaggtacaaaaagtatttataacccgcagcaacatcattaaagctatgcggcagtat
ttggataaagagggcttcttggaagtagagactccgacgatgcatgccattgccggtggg
gcaacggccagaccttttaccacgcatcataatgcactggatatagatctttatatgcgc
attgctctagaactgcatcttaagagattactggttggcggtttagaaaaggtctatgag
ataggtagagtttttcgtaatgaaggcatctcgaccaagcataatccggaattcacgatg
attgagctttatcaagcttatgcggattaccatgacatgatgaaactgacggagaacttg
attagttttgttgcccaggagacgctgggtacacaggctattacataccaagggacggaa
ataaatttagcaccgccctggaaaagggttaccatgttggatgccataaaagaacatgcg
aatgtggatttcagcagtattaacactcaggatgaagtggataagctcattgataaattg
gacatggaactagaaaagggcactcctaagggtaaggtaataaatgaagtctttgaaata
tttgtggaaccgcatttgattcagcctacttttattatggattatccgatagaagtatct
ccattggctaagaggaagaaagaagaccctaattttacatcacggtttgaagcttttatc
ttcgcccgggaattagctaatgccttttccgaattaaatgaccctatagatcagaaagaa
cgttttctttctcaggtgaagcaaagagaaacaggggatgatgaggcccacatgatggac
gaggacttcgtgcgtgcactagaaaccggcatgcctcctgcaggcggattgggcataggc
attgataggttgataatgctcttaaccaattcaccatccattcgggacgtaatactgttc
cctactatgcgaccaagagaaaatgattag
DBGET
integrated database retrieval system
