Metallumcola ferriviriculae: MFMK1_000540
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Entry
MFMK1_000540 CDS
T10258
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
dbc Metallumcola ferriviriculae
Pathway
dbc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MFMK1_000540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dbc03400
]
MFMK1_000540
Enzymes [BR:
dbc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MFMK1_000540
DNA repair and recombination proteins [BR:
dbc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MFMK1_000540
Prokaryotic type
MFMK1_000540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WRO20750
UniProt:
A0AAU0UKM5
LinkDB
All DBs
Position
complement(526259..526933)
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AA seq
224 aa
AA seq
DB search
MQILENDWHFLLEEEFERDYYLKLRKFLINEYRTKTVYPDMYDIFNALHFSEFKDVKVVI
LGQDPYHGPSQAHGLSFSVKPEVSAPPSLMNIYKELHSDLGCYIPNNGYLKKWADQGVML
LNTVLTVRAGQANSHKNKGWENFTDKIIHLLNDREEPTVFILWGKNAQSKLGIIRNSRHY
IIKSVHPSPLSAHRGFFGSKPFSKANKFLNTIGKEPIDWQIENI
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatattagaaaatgattggcattttttattggaagaggagtttgaaagagattac
tacttaaaacttagaaagtttctgataaatgaatacagaacaaaaactgtatatccagat
atgtatgatatattcaacgctttacacttttcagagtttaaggatgtaaaagtagttata
ttaggtcaggacccgtatcatggtcccagtcaggcccatggtttgagcttttctgtaaaa
ccagaggtgtcagcgcccccttctcttatgaatatctacaaagaactgcatagtgatttg
ggctgttatatccctaataacggttacttaaagaaatgggctgaccaaggggttatgctt
cttaatactgtattaacagttagagcaggacaagcaaattctcacaaaaataaaggctgg
gaaaatttcactgataagataattcatttattaaatgaccgggaagaacctaccgttttc
atattatggggaaagaatgctcaatctaaattaggtataataagaaactccagacattat
ataataaaatccgttcatccaagtccactatctgcacaccgaggtttctttggaagcaag
cctttttctaaggctaataaatttcttaatacaataggcaaggaacctattgactggcaa
attgaaaatatataa
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