Metallumcola ferriviriculae: MFMK1_001509
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Entry
MFMK1_001509 CDS
T10258
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dbc Metallumcola ferriviriculae
Pathway
dbc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MFMK1_001509 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dbc03400
]
MFMK1_001509 (mutM)
Enzymes [BR:
dbc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MFMK1_001509 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MFMK1_001509 (mutM)
DNA repair and recombination proteins [BR:
dbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MFMK1_001509 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
NFACT_N
HMBD
Motif
Other DBs
NCBI-ProteinID:
WRO21698
UniProt:
A0AAU0UK39
LinkDB
All DBs
Position
1532965..1533786
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AA seq
273 aa
AA seq
DB search
MPELPEVETVRRSLEPRLLGRSIKQAYIYLPRIIKKPDAESFTRLLAGRTVETVDRRGKY
LLIRLAGDYTWVVHLRMTGQLVYSEIKSEHKHLRLTFELDDGNWLNFIDMRTFGSMYLLS
DDRLDEINGLKTMGPEPLEDDFIMADFYQRLQGSSRAVKNLLLDQTVVAGLGNIYVDEAL
FLAGIHPSRGGSSLTEEEAAKLFQAIKEVLQKGIENRGTTFRDYVDGAGAKGKNQHTLNV
YGRGGESCSLCGTKLVKFRLGGRGTVFCPDCQK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccggaagtggaaactgtcagacgttcccttgagccccgattgttgggg
cgaagcattaaacaggcgtatatctatttaccgcgaataattaaaaaaccggatgcggag
agctttaccagactgctcgccggccgcacggtggagactgtggaccgccggggtaaatat
ctgctaattcgcttggcaggggactatacctgggtagtgcacctgcgtatgaccggccag
ctggtttattcagagataaaaagcgagcacaagcacttgcggctcacctttgaattagat
gatggtaactggttgaactttattgacatgcgtacctttggcagtatgtatctactttct
gatgaccggctggatgaaataaatggtctaaaaacgatgggccccgagccgttagaagat
gattttattatggctgacttttatcagcgtttacaagggagcagcagggcggtaaagaat
ttgctgcttgaccagacggtagtggccgggctgggtaatatttatgtagatgaggctttg
tttttggccggaatacatccgtctcgcggcggctcatcattaaccgaggaggaagccgct
aagctttttcaagcgataaaagaggtgctccaaaagggtattgaaaaccgaggtactact
tttcgcgattatgtagacggtgccggcgcgaagggcaaaaatcagcataccctcaatgtt
tacggacgcggtggcgagtcatgctctctttgtggtacaaagttagtgaagtttcgcttg
ggaggtagggggacagttttttgccctgattgccagaaatag
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