| Entry |
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| Symbol |
addB
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| Name |
(GenBank) helicase-exonuclease AddAB subunit AddB
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| KO |
| K16899 | ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] |
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| Organism |
dbc Metallumcola ferriviriculae
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| Brite |
KEGG Orthology (KO) [BR:dbc00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:dbc03400]
MFMK1_001685 (addB)
Enzymes [BR:dbc01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MFMK1_001685 (addB)
DNA repair and recombination proteins [BR:dbc03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MFMK1_001685 (addB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1690078..1693554
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| AA seq |
1158 aa
MSVTFILGRAGSGKTHFCLEEIKEELLQNPEGPPLIFLVPEQATFQLERELINTPGLDCF
ARVQVLSFRRLAFRIFQQTGGMVRPHISEMGKRMLIRSVLAKEAKNLKLFSHLSGDFGFC
DTVASSISEFKMYGLAAEELECEAAALVDNVAKKLLADKLHDMAIAYQGLETALDGRYTD
PDDYMRWVAEKMPESDLIQGAKVWVDGFSGFTVHEYAVLAQLFSSAAVVKMALCLPHWAA
ADKLSEHDIFYPTWRTYQQLLALSAETGAAVEKTVKLEGKPPRFNNPWLQHLEAQLSCWP
GEQKEGQPQGIRVTGAANRRTEIETAARQMIALARDRDWRWREMSVMCRGLEPYADLVRT
IFKDYGIPFFIDKSQGVAHHPLVELLRSSMETVASNWRHEVVFRCLKTDLLPLDREEVDR
LENYCLACGIEGSLWTMEHRWQYIAELDLENNVAAVKSQEDYLADINELRDKVRACFQPL
AQFSSGRHKVREISRACWQYLDLLAVAENMAVWRDEDERQGDLTRAQEHVQVWDQVIELL
DQMVECLGEEELTLREYLTILEAGLEQLKVGLIPPGLDQVLVGSIDRSRNPNVKALFFLG
ANDGIFPRQFSEEQIFGDEEREYLQAEGLEIALSSRMKLLEEQYFIYIGMTRASQYLSIS
YALADEEGKEMRPSAILHTIKNIFPQLEIDYCGMEPEGECQTREYLVPGPGSIILLINKL
RQVKEGAEFPLVWQNLFNFYLNRNSTRDLLLSLLGSLSFSPSQKNLSDDSINQLYSNPIK
VSVSRLEQYARCPFSYFAEHVLKLRERRQLTLDALNLGKIYHQILSEFVLNLEQEQLLWK
TLDAVKKKELADRVLAQIHRNLERTGLLKDAKNRYLLKQVRENIYYALDILTEHAQRGEF
VTRWVETSFDRGGQLQPLEVQVNEKWSLMLRGRVDRIDLTDGGGKKYLRIVDYKTNDTRF
HWWQFYYGLQLQLLTYLWAAVDSIPALVAEEVAAAGAFYFPVSRPLVASNGPLTEEAAHR
QVKLKSKMQGVLLRDHEAVSRMGVDGVGYSDLLPVQIKKDGDFGGGRNSSNLLTNEQLSQ
VLKFTESKIRQLGKKIAAGEIRAYPYWHKKDTPCGRCGYKPICWFDSSFSGCGYNFLRPM
NDQQLLENICQYGEGGEE |
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| NT seq |
3477 nt +upstreamnt +downstreamnt
atgtctgtgacattcattcttggacgagctggaagcggcaagacgcatttttgcttggag
gaaatcaaagaagaacttttacaaaatcctgaaggaccgccactgatttttttggtaccg
gaacaggcaacctttcagctggaacgggaattgattaatacgcccggattagattgtttc
gccagagtacaagtattgagctttcgtagactggcttttcgaatttttcaacagaccggc
ggtatggttcgcccgcatatatcggaaatgggtaagcgaatgctgattcggtcggtcttg
gcaaaggaagcaaaaaacctaaagttattttcccacttgagcggagactttggtttttgt
gatacggtggccagttccatcagcgaatttaaaatgtatgggttggcagcagaagagctg
gaatgtgaggctgctgcactagtagataatgttgccaagaaattattagccgataaactg
catgatatggccattgcctatcaaggtctagaaacagcgctggatggccgctatactgac
cccgacgattacatgcgttgggtggctgaaaaaatgcctgagtcggatttgattcaggga
gcgaaggtatgggtagatggtttttccgggtttacggttcatgaatatgctgtattggct
cagttgttttcctcagcagcagtagtaaaaatggctctttgtttaccccattgggccgca
gctgataagttaagtgaacatgatatattctaccctacatggagaacttaccagcagtta
ttagctttatctgcagagactggtgctgctgtagaaaaaacggtaaaactggagggtaaa
ccgcctcgttttaacaacccttggctccaacacctcgaagcgcagcttagttgttggccg
ggagagcagaaagaggggcagcctcagggaattcgggtgaccggggcagcaaatcggcga
acagagattgaaaccgccgcgcggcagatgattgctcttgccagggatagggactggcgc
tggcgggaaatgtcagtcatgtgccgtggcctggaaccttatgcagatctggtaagaaca
atctttaaggattatggaattcctttctttattgataagagccaaggggtggctcatcac
cccttggttgaattgctgcgctcatccatggaaacggtggcttccaattggcgtcacgag
gtagtttttcgctgcttaaaaaccgatttgctgcctttggatagagaagaggttgataga
ttagaaaattattgcctggcctgtggaattgagggcagcctgtggaccatggagcatcgt
tggcagtatattgctgagcttgacttagagaataatgttgcagcagttaagtcccaggag
gattatctggcagacatcaatgaattgcgtgataaagttagggcttgttttcaaccattg
gctcagtttagcagcggcaggcataaggttagggaaataagccgggcctgctggcagtac
cttgacctgcttgcggtggcagaaaatatggcggtttggcgcgatgaagacgagagacag
ggtgatttgaccagagctcaggaacatgtacaggtgtgggaccaggtaattgaattactg
gaccagatggtagagtgtctgggggaggaagaattgaccctcagggaatatctgactatt
ttggaggctggtttggagcagcttaaggttggtttaattccgccggggttggatcaggta
ttggtgggaagtatagatcgttctcgtaatcctaatgtaaaagctttatttttcttaggc
gctaatgatggtattttcccgcggcaatttagtgaggagcaaatttttggtgatgaggaa
agggaatacctgcaggctgaaggattggaaattgccctttccagcagaatgaaattactg
gaggagcagtactttatctacattggcatgacccgagccagccaatacttatcaattagt
tatgctttggcggacgaggaaggcaaggaaatgagaccgtcggcaatattacataccatt
aagaatatatttccgcagctggaaatcgactattgtggaatggaacctgagggtgagtgt
cagacccgggaatacctggtgcctggaccgggtagcattatcctgttaataaataaactg
cgacaggttaaagaaggagcggagttccctctggtatggcaaaacctgtttaacttttat
ctcaacaggaattctacacgggatctgctgcttagcttgttggggtcactgagtttctca
cccagtcagaagaatttatctgatgatagtataaatcagctttactccaacccgatcaag
gttagtgtatctcgtttggagcagtatgcgcgttgccccttcagttattttgctgagcat
gtgttgaagcttagggaaaggcgtcaattaactttagatgctttaaatcttggcaagatc
tatcaccaaattttatcggagtttgtcctcaatttagaacaggaacaactgctgtggaaa
acacttgacgctgtgaagaaaaaagaattggcagatagagtactggcccaaattcatcgt
aatcttgaaagaacaggtttgctaaaagatgcgaaaaatcgttaccttcttaagcaggta
agggagaacatttactacgctttggacatcttgacggaacacgcccaacgaggtgagttt
gttacgcgctgggtggagacatcctttgaccgaggtggtcaacttcagccgttggaggta
caggtaaacgaaaaatggtcactgatgttacgaggcagagtagatagaattgatttaaca
gacggcggaggcaagaaatatttgaggatagttgattataagactaatgacaccagattc
cattggtggcagttttattacggactacagctgcagttattaacttatttatgggcagca
gtggattcaataccagctttggtagctgaagaagtagctgctgcaggagcgttctacttt
ccggtgagtcgtccgctggtagcttccaatgggccgctgaccgaggaagcagctcatcga
caagtaaagcttaagagtaaaatgcagggggtattgctcagggaccatgaagctgtcagc
cgtatgggggtagatggggttggctactcagatttattgccggtgcaaataaaaaaagat
ggggactttggcggaggcagaaatagtagtaatttacttaccaacgagcagttgtcccag
gtacttaaatttacggagagtaaaataagacagctgggcaaaaaaatagcagccggtgaa
attcgtgcctatccatactggcataaaaaagatacaccgtgcggcagatgtggatacaag
ccgatatgctggtttgacagtagtttctcaggatgcggctataactttttgcggccgatg
aatgaccagcagctgctagagaatatctgccaatacggcgaagggggtgaggaatag |
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