Metallumcola ferriviriculae: MFMK1_001685
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Entry
MFMK1_001685 CDS
T10258
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
dbc Metallumcola ferriviriculae
Brite
KEGG Orthology (KO) [BR:
dbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dbc03400
]
MFMK1_001685 (addB)
Enzymes [BR:
dbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MFMK1_001685 (addB)
DNA repair and recombination proteins [BR:
dbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MFMK1_001685 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
WRO21864
UniProt:
A0AAU0UM63
LinkDB
All DBs
Position
1690078..1693554
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AA seq
1158 aa
AA seq
DB search
MSVTFILGRAGSGKTHFCLEEIKEELLQNPEGPPLIFLVPEQATFQLERELINTPGLDCF
ARVQVLSFRRLAFRIFQQTGGMVRPHISEMGKRMLIRSVLAKEAKNLKLFSHLSGDFGFC
DTVASSISEFKMYGLAAEELECEAAALVDNVAKKLLADKLHDMAIAYQGLETALDGRYTD
PDDYMRWVAEKMPESDLIQGAKVWVDGFSGFTVHEYAVLAQLFSSAAVVKMALCLPHWAA
ADKLSEHDIFYPTWRTYQQLLALSAETGAAVEKTVKLEGKPPRFNNPWLQHLEAQLSCWP
GEQKEGQPQGIRVTGAANRRTEIETAARQMIALARDRDWRWREMSVMCRGLEPYADLVRT
IFKDYGIPFFIDKSQGVAHHPLVELLRSSMETVASNWRHEVVFRCLKTDLLPLDREEVDR
LENYCLACGIEGSLWTMEHRWQYIAELDLENNVAAVKSQEDYLADINELRDKVRACFQPL
AQFSSGRHKVREISRACWQYLDLLAVAENMAVWRDEDERQGDLTRAQEHVQVWDQVIELL
DQMVECLGEEELTLREYLTILEAGLEQLKVGLIPPGLDQVLVGSIDRSRNPNVKALFFLG
ANDGIFPRQFSEEQIFGDEEREYLQAEGLEIALSSRMKLLEEQYFIYIGMTRASQYLSIS
YALADEEGKEMRPSAILHTIKNIFPQLEIDYCGMEPEGECQTREYLVPGPGSIILLINKL
RQVKEGAEFPLVWQNLFNFYLNRNSTRDLLLSLLGSLSFSPSQKNLSDDSINQLYSNPIK
VSVSRLEQYARCPFSYFAEHVLKLRERRQLTLDALNLGKIYHQILSEFVLNLEQEQLLWK
TLDAVKKKELADRVLAQIHRNLERTGLLKDAKNRYLLKQVRENIYYALDILTEHAQRGEF
VTRWVETSFDRGGQLQPLEVQVNEKWSLMLRGRVDRIDLTDGGGKKYLRIVDYKTNDTRF
HWWQFYYGLQLQLLTYLWAAVDSIPALVAEEVAAAGAFYFPVSRPLVASNGPLTEEAAHR
QVKLKSKMQGVLLRDHEAVSRMGVDGVGYSDLLPVQIKKDGDFGGGRNSSNLLTNEQLSQ
VLKFTESKIRQLGKKIAAGEIRAYPYWHKKDTPCGRCGYKPICWFDSSFSGCGYNFLRPM
NDQQLLENICQYGEGGEE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgacattcattcttggacgagctggaagcggcaagacgcatttttgcttggag
gaaatcaaagaagaacttttacaaaatcctgaaggaccgccactgatttttttggtaccg
gaacaggcaacctttcagctggaacgggaattgattaatacgcccggattagattgtttc
gccagagtacaagtattgagctttcgtagactggcttttcgaatttttcaacagaccggc
ggtatggttcgcccgcatatatcggaaatgggtaagcgaatgctgattcggtcggtcttg
gcaaaggaagcaaaaaacctaaagttattttcccacttgagcggagactttggtttttgt
gatacggtggccagttccatcagcgaatttaaaatgtatgggttggcagcagaagagctg
gaatgtgaggctgctgcactagtagataatgttgccaagaaattattagccgataaactg
catgatatggccattgcctatcaaggtctagaaacagcgctggatggccgctatactgac
cccgacgattacatgcgttgggtggctgaaaaaatgcctgagtcggatttgattcaggga
gcgaaggtatgggtagatggtttttccgggtttacggttcatgaatatgctgtattggct
cagttgttttcctcagcagcagtagtaaaaatggctctttgtttaccccattgggccgca
gctgataagttaagtgaacatgatatattctaccctacatggagaacttaccagcagtta
ttagctttatctgcagagactggtgctgctgtagaaaaaacggtaaaactggagggtaaa
ccgcctcgttttaacaacccttggctccaacacctcgaagcgcagcttagttgttggccg
ggagagcagaaagaggggcagcctcagggaattcgggtgaccggggcagcaaatcggcga
acagagattgaaaccgccgcgcggcagatgattgctcttgccagggatagggactggcgc
tggcgggaaatgtcagtcatgtgccgtggcctggaaccttatgcagatctggtaagaaca
atctttaaggattatggaattcctttctttattgataagagccaaggggtggctcatcac
cccttggttgaattgctgcgctcatccatggaaacggtggcttccaattggcgtcacgag
gtagtttttcgctgcttaaaaaccgatttgctgcctttggatagagaagaggttgataga
ttagaaaattattgcctggcctgtggaattgagggcagcctgtggaccatggagcatcgt
tggcagtatattgctgagcttgacttagagaataatgttgcagcagttaagtcccaggag
gattatctggcagacatcaatgaattgcgtgataaagttagggcttgttttcaaccattg
gctcagtttagcagcggcaggcataaggttagggaaataagccgggcctgctggcagtac
cttgacctgcttgcggtggcagaaaatatggcggtttggcgcgatgaagacgagagacag
ggtgatttgaccagagctcaggaacatgtacaggtgtgggaccaggtaattgaattactg
gaccagatggtagagtgtctgggggaggaagaattgaccctcagggaatatctgactatt
ttggaggctggtttggagcagcttaaggttggtttaattccgccggggttggatcaggta
ttggtgggaagtatagatcgttctcgtaatcctaatgtaaaagctttatttttcttaggc
gctaatgatggtattttcccgcggcaatttagtgaggagcaaatttttggtgatgaggaa
agggaatacctgcaggctgaaggattggaaattgccctttccagcagaatgaaattactg
gaggagcagtactttatctacattggcatgacccgagccagccaatacttatcaattagt
tatgctttggcggacgaggaaggcaaggaaatgagaccgtcggcaatattacataccatt
aagaatatatttccgcagctggaaatcgactattgtggaatggaacctgagggtgagtgt
cagacccgggaatacctggtgcctggaccgggtagcattatcctgttaataaataaactg
cgacaggttaaagaaggagcggagttccctctggtatggcaaaacctgtttaacttttat
ctcaacaggaattctacacgggatctgctgcttagcttgttggggtcactgagtttctca
cccagtcagaagaatttatctgatgatagtataaatcagctttactccaacccgatcaag
gttagtgtatctcgtttggagcagtatgcgcgttgccccttcagttattttgctgagcat
gtgttgaagcttagggaaaggcgtcaattaactttagatgctttaaatcttggcaagatc
tatcaccaaattttatcggagtttgtcctcaatttagaacaggaacaactgctgtggaaa
acacttgacgctgtgaagaaaaaagaattggcagatagagtactggcccaaattcatcgt
aatcttgaaagaacaggtttgctaaaagatgcgaaaaatcgttaccttcttaagcaggta
agggagaacatttactacgctttggacatcttgacggaacacgcccaacgaggtgagttt
gttacgcgctgggtggagacatcctttgaccgaggtggtcaacttcagccgttggaggta
caggtaaacgaaaaatggtcactgatgttacgaggcagagtagatagaattgatttaaca
gacggcggaggcaagaaatatttgaggatagttgattataagactaatgacaccagattc
cattggtggcagttttattacggactacagctgcagttattaacttatttatgggcagca
gtggattcaataccagctttggtagctgaagaagtagctgctgcaggagcgttctacttt
ccggtgagtcgtccgctggtagcttccaatgggccgctgaccgaggaagcagctcatcga
caagtaaagcttaagagtaaaatgcagggggtattgctcagggaccatgaagctgtcagc
cgtatgggggtagatggggttggctactcagatttattgccggtgcaaataaaaaaagat
ggggactttggcggaggcagaaatagtagtaatttacttaccaacgagcagttgtcccag
gtacttaaatttacggagagtaaaataagacagctgggcaaaaaaatagcagccggtgaa
attcgtgcctatccatactggcataaaaaagatacaccgtgcggcagatgtggatacaag
ccgatatgctggtttgacagtagtttctcaggatgcggctataactttttgcggccgatg
aatgaccagcagctgctagagaatatctgccaatacggcgaagggggtgaggaatag
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