Metallumcola ferriviriculae: MFMK1_001700
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Entry
MFMK1_001700 CDS
T10258
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dbc Metallumcola ferriviriculae
Brite
KEGG Orthology (KO) [BR:
dbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dbc03019
]
MFMK1_001700
Messenger RNA biogenesis [BR:
dbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MFMK1_001700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Cas3_HD
FA_desaturase_2
HD_3
Motif
Other DBs
NCBI-ProteinID:
WRO21879
UniProt:
A0AAU0UM76
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All DBs
Position
1713106..1714059
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AA seq
317 aa
AA seq
DB search
MKQYINELQPGVKVNSVFALAKKQLIPFRDPSKGKFLSLVIADKTGQIEAKLWDGAEEIA
AGLAEEDLIQVEGAVSEYRGSNQITIEKVSPAAAGKWQPEDFLPAGKDKQLLLDELRQLV
ASLNNEHLKTLLANWFSDKDFLQQYLTCPAAKKVHHACIGGLAEHSLEVCSYAVQVAKNY
SKINRDVVLVGALLHDIGKIMEYRYQTSIAVTDSGKLFGHPVLGWDMIAERIGMQPDFPA
PLADHLKHIILTHHGQLEWGAPVLPQTPEAMTVFYCDLLSGRIRQVFDIIQQDEDDELWT
RYDRLISRAIYRGYKED
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtatattaatgaactgcagcccggtgtaaaggttaattctgtatttgcatta
gctaaaaaacagttaattccgtttagagaccctagtaaaggaaaatttttatctttggtc
attgctgataagaccggccaaattgaagcgaaactatgggacggagcggaagagattgct
gctggactggcagaggaggacctgatacaggtggaaggagcggtttcagaatataggggg
tcaaatcagatcaccattgaaaaagtctcccctgcggccgcaggaaaatggcagcctgag
gattttttgcccgcgggtaaagataaacagcttttgctggacgagctgcggcaactggtg
gcgtctcttaataatgaacatctaaaaaccctgctggcaaattggttcagcgataaggat
tttttgcagcagtatttaacctgcccggcagcgaaaaaggtacaccatgcatgtattggc
ggtctggcagagcatagtcttgaagtgtgcagctatgcggtacaggtggcaaaaaattat
tcgaaaataaacagggatgtggtattggttggtgccctgctgcacgacatcggcaagatt
atggaataccgctatcagaccagcattgccgtcacagatagcggcaaactgtttgggcat
ccagtactgggatgggatatgattgctgaacgaataggtatgcagccggatttccccgca
cctttagctgaccacctaaagcacatcattctgacgcatcatgggcaattggaatggggg
gcgcctgtactgccccagactcccgaagcgatgaccgttttttattgtgatttgctaagc
gggagaattaggcaggtatttgacattatccaacaagatgaggatgatgagttatggacc
cggtacgaccgtttaatttctcgggcaatttatcggggatacaaggaagactaa
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