Metallumcola ferriviriculae: MFMK1_002093
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Entry
MFMK1_002093 CDS
T10258
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dbc Metallumcola ferriviriculae
Brite
KEGG Orthology (KO) [BR:
dbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dbc03016
]
MFMK1_002093 (truB)
Enzymes [BR:
dbc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MFMK1_002093 (truB)
Transfer RNA biogenesis [BR:
dbc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MFMK1_002093 (truB)
Prokaryotic type
MFMK1_002093 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA_3
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WRO22268
UniProt:
A0AAU0ULP0
LinkDB
All DBs
Position
2119236..2120144
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AA seq
302 aa
AA seq
DB search
MDGFINVLKPPGMSSHDVVAWARKTFQQKKVGHTGTLDPGAAGVLVLAMGKATRLSEYVL
NLQKSYRCLLRLGVTTDSGDSYGNVISTSLVRDVSNKEISLVLSHFTGEIEQIPPMTSAI
KINGKKLYELARKGETVARKKRKITIFSLDFVRRSTDGEKKDFFLDVTCSKGTYIRTLCA
DIGSALGCGGMMQFLVRTAVGPFLLKEAFSLDELSNISSHPTQFLYPMDTALRDLPKVRL
PEERITVKLQNGGTARVCREFEAGAGTEVAVYDHCDQFIAIAIIEESSSGSTILRPRKVL
YL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
ttggatgggtttattaacgtattaaagccgccgggcatgtcttcccatgacgtagttgcc
tgggccagaaaaacttttcaacagaaaaaagtcgggcatacagggacattagacccaggc
gctgcaggggttttggtgttggctatgggtaaagccacccggttaagtgaatacgttcta
aacctgcaaaagagctaccgctgcttgctaagattaggagtgaccactgatagcggagac
agctatggtaacgttatctctacaagtctagtgagggatgttagtaataaagaaatttcg
ctggtattatcgcattttacgggtgagattgaacaaattccacctatgacatccgcgatt
aagattaatggaaaaaaattatatgaacttgccagaaaaggggaaaccgttgcccgaaaa
aaaagaaaaataactatttttagtctggattttgttcgcagatctacggatggggaaaag
aaagatttttttcttgacgtaacttgttcaaagggcacatacattcgtacactttgtgct
gatattggctcagcactagggtgtggtggaatgatgcagtttttggtaaggacagcagtc
ggaccttttcttttaaaggaagcattctcattagatgaactatctaatatatcttcgcat
ccgacacaattcttatatcccatggatactgcattaagggacctgcccaaggtaagatta
ccagaagaaagaataaccgtgaagctgcaaaacgggggaactgcccgtgtttgcagggaa
tttgaagcaggggcaggaacagaagtagctgtttacgaccactgcgaccagtttattgcc
atcgcaattatagaggaaagcagttccgggtccactatattgaggcctaggaaagtatta
tatctttga
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