Metallumcola ferriviriculae: MFMK1_002164
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Entry
MFMK1_002164 CDS
T10258
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dbc Metallumcola ferriviriculae
Brite
KEGG Orthology (KO) [BR:
dbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dbc03009
]
MFMK1_002164 (rimO)
Enzymes [BR:
dbc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MFMK1_002164 (rimO)
Ribosome biogenesis [BR:
dbc03009
]
Prokaryotic type
ribosomal protein modification factors
MFMK1_002164 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WRO22335
UniProt:
A0AAU0UPV6
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All DBs
Position
2196227..2197531
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AA seq
434 aa
AA seq
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MTSVKIETLGCSKNLVDSEIILGSLVHAGMHLVDDCTNAEIIIVNTCGFIAPAKEESINT
ILEMAMYKENGKCKKLVVTGCMVGKYGVELAKEIPEIDLLAESSDVTKIVDALGLRETSA
NNALLRTETTNMQHTRYLKISEGCNNNCTYCTIPQLKGNYKSRSMEEIVKEAEFLVQSGA
KEIVLVAQDTTRYGVDLSGKRMLAKLVKALVKIEGLEWLRMLYCYPSEFTPELINIIANE
EKVCNYLDIPLQHVSDDILKRMGRRSDKKQIVSLLETLRKEIPDITIRSTFIVGFPGETE
GEFNELLSFLKSAKLDWVGAFTYWPEADTAAAEFQDQVSQREKEKRLDILMEMQRHITAD
KNSQLIGKKIDVIIEGISSDYPEYKVGRSQRQAPEVDGIVYVTTSVEPGEIISVRITGVW
GDYDLLGEDAGEFS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgactagtgtaaaaattgaaacacttggttgctctaaaaaccttgtagacagtgaaata
attttagggtcattggtacatgcaggtatgcatttagtggatgattgtacaaacgcagaa
attattattgtaaatacgtgcgggtttattgccccggcaaaggaagagtctataaataca
attcttgaaatggcaatgtataaggagaacgggaagtgcaagaaactggtggtaaccggg
tgtatggtagggaaatatggcgtggaattggccaaggaaattcccgaaattgacctgctg
gctgaaagcagcgatgttactaaaatcgttgatgccctgggtttaagagaaactagtgca
aacaacgctctattacgaacagagaccacaaatatgcagcatacccgttatttgaagatt
tctgaagggtgtaataataattgcacatactgtacgattccccagttaaagggtaattac
aaaagcaggtctatggaggaaatagtgaaagaagctgaatttcttgttcaatctggggca
aaggaaattgttttagtggctcaggatacgactaggtacggtgttgatttatctggtaaa
agaatgctagcaaagttagtcaaagcattagtaaagattgaaggactggaatggctcaga
atgttgtactgctatcccagtgagtttacgccagagttgattaacattatcgcgaatgaa
gaaaaggtatgtaattatttggatatcccgcttcagcatgtatctgatgatatattgaag
cgtatgggcaggcgtagtgataaaaagcagatagtaagtctgctagaaactctccgaaaa
gaaatccccgacattacaatcagatctacttttatcgtcggatttcccggtgaaacggag
ggtgaatttaacgaacttttaagttttcttaaatctgctaaattagattgggttggcgcg
tttacttattggccggaagcagatactgctgcggcagaatttcaggaccaagtttcccag
cgggaaaaagaaaagcggttggatattttaatggaaatgcagcgccatattactgcggac
aaaaatagccaactgattggcaaaaaaattgatgtcatcatagaaggaatttcctcagat
taccccgaatataaagtgggtagatctcaacgtcaggctccggaagtagatgggattgtc
tacgttactacttcagtcgagccgggagaaatcatctcggtacgcattaccggtgtttgg
ggtgattatgatttgctaggagaggatgcgggtgaatttagctaa
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