Metallumcola ferriviriculae: MFMK1_002811
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Entry
MFMK1_002811 CDS
T10258
Name
(GenBank) bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
dbc Metallumcola ferriviriculae
Pathway
dbc00900
Terpenoid backbone biosynthesis
dbc01100
Metabolic pathways
dbc01110
Biosynthesis of secondary metabolites
dbc03010
Ribosome
Module
dbc_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
dbc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
MFMK1_002811
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
MFMK1_002811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
dbc03011
]
MFMK1_002811
Enzymes [BR:
dbc01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
MFMK1_002811
Ribosome [BR:
dbc03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
MFMK1_002811
Bacteria
MFMK1_002811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
OB_RRP5_4th
PCB_OB
DUF2187
Egh16-like
Motif
Other DBs
NCBI-ProteinID:
WRO22965
UniProt:
A0AAU0URQ7
LinkDB
All DBs
Position
complement(2896920..2899103)
Genome browser
AA seq
727 aa
AA seq
DB search
MEIVLADYAGFCFGVKRALQMTHEASGRHNSLKSLGPLIHNPQVVEQLERQGVGVAHNTD
EVQDDVVIIRSHGVSPDVLERLEGKAKATINATCPFVSRAQQLANRLTEEGYRTVVVGDK
NHPEVIGIVGWTKGKAIVVETPEQAQGLDLHGEKVAVIAQTTQPEENFRAAVEILKKQKN
DLVVHNTICHATRERQEAASRLARSVDLMVVVGGRNSANTKKLAKLCQATGTPTYHIEHA
GELCAPWFQDIKRVGVTAGASTPEWIIEEVVEKMTDIKNEDINKEEMEQEGTAAETVEQE
AEENAAQEAVPTEVEAAADEPTNPDDTAEDQDAVEAHLAENMPEIRRGSVITGTVVQVND
NGVMVDVGGKSEGIIPLNELSVNWVDQPDEVVNVGDEVVVEVLRVENEEGNPILSRKRLQ
RKQVWEKLEKTAESGEEIEAVVSEVVKGGLLVDVGIKGFVPASLAERGYVEDLSVYVGKT
LRLKIIEMDRSKNKVVLSQKAILDEEFEKQRQETWGNLEEGEVRQGIVRRITDFGAFVDI
GGVDGLLHVSELSWGRVDHPRDVLQEGQELEVKVLGVDREDERVSLGLKQLSANPWQTAA
ERYPEGTVVSGKVLRTAPFGAFVEVEPGIEGLVHISQLAHEHVEKTDDAVQPGDQVEVKV
LGVDEDAQRMSLSIKETQPRPQRQAPSRPKAEPSKSHSYTQEEDSGIKIKDLVGDLSEMF
EKRGEEE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
ttggaaattgttttagccgattatgcggggttttgttttggtgtcaaacgtgccctgcag
atgacccatgaggcctcgggcaggcacaattcattgaaatcattgggccctctgatacat
aatcctcaagtagtcgaacaacttgaacggcagggagtgggtgttgctcataataccgat
gaagtgcaggatgatgtggtcattatccggtcccacggggtatctcctgatgtattggaa
agattggagggtaaagcaaaggccaccattaatgctacatgtccttttgtcagccgggcc
cagcagcttgccaaccgattaaccgaagaaggataccggacagtggtggttggcgacaag
aatcatccggaagttattggtattgtaggctggaccaaggggaaagctattgttgtggaa
accccggaacaggcccaaggattggatttgcacggggaaaaggttgctgttattgctcaa
actactcagccggaagaaaactttcgagctgcggtggagatacttaaaaaacagaaaaat
gacctggtagtgcataataccatttgtcatgccacccgggaacgccaggaggcagccagt
cgattggcccgctccgttgacttgatggtcgtggtgggcggcagaaatagtgctaacact
aagaaactggccaagctttgtcaggccaccggtactcccacatatcacattgaacatgcc
ggggagttatgtgcaccatggtttcaagatataaaaagggttggagtgacagcgggtgct
tcaacaccagaatggattattgaggaggtagttgagaaaatgacggatattaagaatgaa
gacatcaacaaagaagaaatggaacaggagggcactgccgctgagacggttgagcaggaa
gcagaagaaaacgctgctcaagaggcagtacctaccgaagtggaagctgctgcagacgaa
cccaccaatccagatgacactgcggaggatcaagatgcagttgaagctcacttagcggaa
aatatgcctgaaatacgccggggttctgtgattaccggaacggtggttcaggttaacgat
aacggtgtaatggttgacgtcggcggtaagagtgaaggcattatcccactaaatgagttg
tcggtaaactgggttgaccagccggatgaagtggttaatgtaggcgatgaggttgttgtg
gaagttctgcgggttgaaaatgaagaaggtaaccccattctctccagaaaacgtcttcag
cgcaagcaggtatgggaaaagttagagaaaactgctgaatccggtgaagaaattgaagcg
gtagtcagcgaagtagtgaaaggtggtctgctggtggatgtgggtatcaaaggatttgtt
cccgcaagtctggcggaaagaggatatgtggaagacctcagtgtatatgtaggcaagacc
ctgcgtttgaagataatagaaatggatcgcagcaagaataaggttgttctgtcccaaaag
gcgattttagatgaagaatttgaaaagcagcgccaagagacctggggcaatctagaggaa
ggtgaagtgcgtcagggtatagttcgtcgcatcaccgattttggcgcttttgtagatatc
ggtggcgttgacggtctactccatgtctccgaactgtcttggggacgggttgaccatcct
cgggatgtgttgcaagaaggccaggaattggaagttaaagtattgggagtagaccgtgag
gacgaaagggtatctctaggattaaagcagctttccgccaatccctggcagacagcggca
gaacgttatcctgaaggaacggttgtatccggtaaagtactgcgtactgccccctttggt
gcctttgtggaggttgaacctggtatagaagggctggtacacatttcccaattggcccac
gaacatgtggaaaagactgacgatgctgttcagcccggggaccaagtggaagttaaagta
ctgggagtggatgaggatgctcaacgcatgagcttaagcattaaagaaacccaacctcgt
cctcagcgtcaggcaccgtccagaccaaaggccgagccgtccaaatcccatagctatacc
caggaagaagacagcggtatcaagattaaggacttagtaggggatttaagcgagatgttt
gaaaaaaggggcgaggaagaatag
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