Metallumcola ferriviriculae: MFMK1_003191
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Entry
MFMK1_003191 CDS
T10258
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dbc Metallumcola ferriviriculae
Pathway
dbc03030
DNA replication
dbc03430
Mismatch repair
dbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MFMK1_003191
03430 Mismatch repair
MFMK1_003191
03440 Homologous recombination
MFMK1_003191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dbc03032
]
MFMK1_003191
03400 DNA repair and recombination proteins [BR:
dbc03400
]
MFMK1_003191
Enzymes [BR:
dbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MFMK1_003191
DNA replication proteins [BR:
dbc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MFMK1_003191
DNA repair and recombination proteins [BR:
dbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MFMK1_003191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF6282
Motif
Other DBs
NCBI-ProteinID:
WRO23334
UniProt:
A0AAU0URB3
LinkDB
All DBs
Position
complement(3277492..3280938)
Genome browser
AA seq
1148 aa
AA seq
DB search
MAVTGNFTGETDRYNKFVHLHVHSEYSLLDGAARLENLVTRAKELGMDALALTDHGVMYG
VVEFYKLARKYGIKPIIGCEVYLARRGRFDREANKDDSPYHLVLLAENATGYKNLMALVS
KAYIEGFYYKPRVDKELLREYNQGLIAMSACLAGEIPAAVLDSRIDDARLIALEMSEIFG
KNNFYLEIQDHGLKGQADVTRHLVNLSRGTGIPLVATNDVHYVMPDDTKTHEILLCIQTG
KTLADPNRMDFGSGEFYLKDRSEMEMLFGEYPEALDNTLNIAERCQVDFDFGSLHLPYYE
VPEEYNLDSYLSKLCREGLSRRYEKVTEQHDQRLEYELRIINKMDYPGYFLIVWDLVNFA
RSKGILVGPGRGSAAGSLVAYCLGITDIDPLKYGLLFERFLNPERVSMPDVDIDFCFERR
GEVIDYVAQKYGSDHVAQIITFGTMAAKAAIRDVGRVLGFSPGEVDKIAKLVPNELGITI
TRALKVSDILRERYETEDKTRELIDMAKAIEGMPRHASTHAAGVVIAKEKLTNYVPLQTT
SDKIVTTQFPMSTVEELGLLKMDILGLRTLTVMNHTLRLIRESSGTEVYLKEIPLDDPAV
FEMLSQGDTIGVFQLESSGMRGILKNLKPEQFPDIIALVALYRPGPLGSGMVEDFINRKH
GNTEASYLHPSLENILKETYGVILYQEQVMQIASTLAGFTLGEADLLRRAMGKKKPEVIM
GLRDKFLKGADKNDISSVIAGKIFDLMEYFAGYGFNKSHSAAYALVAYQTAYFKANYPVE
FMSALLTSIMNNTDKVPLYIDECRKMDIKILPPDVNESRMDFTVVGEKIRFGLAAVKNVG
RGAIASIIDAREQNGSFKSLTDFCQRIDLRQVNRRVIESLVKCGAFGSLGLNRAQLLAVL
DQSLDSAQAYQRDRAQGQVSLLDLVGEGDRGDCISERIPDLPEFGPRELLGMEKEMLGFY
VSGHPVASYAEQIKAQTSYEIAKLPLVEDGTRVNLGGIITYVRRAITRKGEAMAYITLED
TGGMVEALVFPRTYSQLNTLLEEDRVVIMSGRLAKSEDELKIFVDGIQWLPEPGTDKLYL
KILDRTHSMDRIKGFLQQFPGETPVYLYFPDNGRCIMTDRGHWVSPQEELINGLKGICGN
ECVKLVNG
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
ttggctgttaccggcaattttactggggagactgaccgatacaataaatttgtgcatctg
catgttcattcggaatatagcctgttagacggagcagctaggttggagaacttagttacc
cgagctaaagagttaggaatggatgccttggcgttaaccgaccatggcgttatgtatggt
gtggtcgaattttacaagttggcccgcaagtacggtatcaaacccattatcggttgtgaa
gtatatttggccaggcggggtcgatttgatcgagaagcgaataaggatgattctccatac
cacttggtactattggcggaaaatgccactggctataaaaacttgatggcattggtttcc
aaagcatacattgaagggttttactacaaaccaagggttgataaagagctgctgagggaa
tataaccaaggattgatagcaatgtctgcttgcttggcaggggagatacctgctgcggta
ctggatagccgtattgacgacgctcggctaatagcacttgaaatgagtgaaatattcggt
aagaataacttttatttggaaattcaggatcacgggctaaaaggacaggcagatgtaacg
cggcatttggtaaatttgtctagggggacagggattcccttagtggctaccaacgatgtt
cactatgttatgcctgatgatactaaaacccatgaaattcttttgtgtatccagacagga
aaaaccctggcagatcccaaccggatggattttggttccggtgagttttacttaaaagac
cgcagtgagatggagatgcttttcggggaataccctgaggcgttggataatacacttaat
attgctgaacgatgccaggtggactttgattttggttctctccacctcccatactatgaa
gtacctgaagaatataacctggacagctatctgagtaaattatgccgtgaaggcctcagc
aggcgttatgaaaaggtgactgaacaacacgaccaacgactggagtatgaactgagaatt
ataaacaagatggattaccccggttattttttgatagtatgggatcttgtcaactttgcc
aggagtaagggcatccttgtcgggccgggtcgggggtccgccgcaggaagcttggtggcc
tattgtcttggaattactgatatagacccgttgaaatacgggttgttgtttgagcggttt
cttaaccccgaacgagtgagtatgccggatgtggacattgatttctgcttcgaacggagg
ggtgaagttattgattatgtggcccagaaatatggcagtgaccatgttgcccaaattatt
acctttggtacgatggccgctaaggctgccattcgcgatgtcggcagggtactgggtttt
tctccgggggaagttgacaaaatagccaagctggtgccaaacgaactgggtataactatt
accagggctttaaaagtaagtgacattctgcgggaacgatacgaaacagaggataagacc
agggaattaatagatatggccaaggcaattgagggaatgccgcggcatgcgtcaacccat
gccgcgggtgttgtgatagctaaagagaaattgactaattatgtaccgctgcagactacc
agcgacaagattgtcaccacccagtttcccatgagtactgttgaagaattgggactgtta
aagatggatattttagggttacgtacccttacggtcatgaatcataccctgcgtttaata
cgggaaagcagtggtacggaagtatatttaaaggagataccattggatgacccggcagtt
tttgaaatgctttcccagggagacaccatcggcgtattccaattagaaagttcaggtatg
cgcggcatccttaaaaacctcaaaccggaacagtttcctgatattatcgccttggttgcc
ttgtatcgcccgggtccgctaggcagtggtatggtggaggattttataaaccgcaagcat
ggaaatacagaggcaagttacctacacccatccttggaaaatatcttaaaggaaacttac
ggtgtaatattgtatcaagaacaggtgatgcaaattgccagtaccttagccggttttact
ttaggtgaagcggacctgctgcgcagggccatgggaaagaaaaaacctgaggtaattatg
gggttacgggataaatttctcaagggtgctgacaaaaacgacattagttcggtaattgca
gggaaaatatttgatttgatggaatactttgccgggtacggatttaataaatctcactcc
gccgcttatgctttggtggcgtatcagacggcatattttaaggctaattatccagttgaa
tttatgtctgctcttctaacaagtattatgaataatactgacaaagttcctttatatatt
gatgaatgccgcaagatggacattaaaatattacctccggatgttaacgagagcagaatg
gattttaccgtagtgggtgagaagatccggtttgggctagctgctgtaaagaatgtcggc
cggggggcaatagcatcaattatcgacgctcgggaacagaatggcagtttcaaatcgtta
acggacttttgtcagcgaatagacctgaggcaggtcaaccgaagggtgatagaaagttta
gttaagtgcggtgcttttggctcactgggtttaaaccgggcgcagcttctggcagtttta
gaccaatctctagattccgcccaagcttaccagcgggaccgtgcccaggggcaggtttct
cttctggatcttgtcggtgagggagataggggagattgtatttccgaacggatacccgat
ctacctgaatttggtccaagagaattattggggatggaaaaagagatgctgggcttttat
gtcagcggtcatccggtggcttcgtatgcagaacaaattaaagcgcagacttcttatgaa
atcgcaaaactaccgctggtagaggacggcacccgggtcaacctgggtgggattattacc
tatgtcaggcgtgctattaccaggaaaggggaggccatggcctatattacattggaagat
acgggcggcatggttgaagctttggtctttccgcgaacatattcccaactaaataccttg
cttgaggaggatcgggtggtaattatgtcaggaaggttagctaaaagtgaagatgaacta
aagatatttgtggatgggattcaatggctgcctgaacccggcaccgataagctgtattta
aaaatattagaccgaacacattctatggacaggatcaaaggctttttgcagcaattccct
ggggaaacacctgtttatctatatttccctgataacggacgttgtatcatgactgacaga
ggacattgggtaagcccgcaagaggaattaataaacggattgaagggtatctgcggtaat
gaatgtgttaagttggtaaatggctag
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