KEGG   Desulfomarina profundi: DGMP_00220
Entry
DGMP_00220        CDS       T07650                                 
Symbol
yhaM
Name
(GenBank) HD family phosphohydrolase
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dbk  Desulfomarina profundi
Brite
KEGG Orthology (KO) [BR:dbk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dbk03019]
    DGMP_00220 (yhaM)
Messenger RNA biogenesis [BR:dbk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DGMP_00220 (yhaM)
SSDB
Motif
Pfam: HD tRNA_anti-codon HDOD TraI_2 Cas3_HD HD_3
Other DBs
NCBI-ProteinID: BCL59329
UniProt: A0A8D5JFW7
LinkDB
Position
19924..20964
AA seq 346 aa
MKKKIFIEQLKQGDRIDDLFLVKSARLAETKAGKPYLILAVMDRSGEVSGPVWENALEMQ
KICQPGIIIKISGVIQSYRDALQLKVERVQSVPRGEVDLGEFLPVSPRNRKEMADELSSL
IRTISNPYLKKLLGRFFGREDDLLIFRDAPAAKGIHHAYIGGLLEHSLSMARLCHLLADH
YDGVNRSLLLTGALLHDIGKLKELQANDGVVEYTVPGRLKGHLVIGCELVGRTAERIKNF
PGDLLVQLQHLILSHHGRQEFGSPVVPMTVEAMILSFVDDLDAKMNLIEQLRRKMNSEDM
EWTEYQRTLERYLYLGGFKEKTEQTDTKKKDVNRRQPSLFPGPEPD
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgaaaaaaaagatatttattgagcagctgaaacagggagatcggattgatgatctcttc
cttgtcaagtcggcacgcctcgcagagacgaaggcggggaagccgtatctcatcctggct
gtaatggacagaagtggtgaggtcagtggtcctgtgtgggaaaatgctcttgaaatgcag
aaaatatgccagcccggaattataataaaaatttccggtgtgatacagtcgtaccgggat
gcacttcagctgaaagttgagcgggttcagtctgtaccccgtggggaagtggatctaggg
gaattcctcccggtttcacccaggaacaggaaggaaatggcggatgagctgtcttcactt
atcaggaccatcagtaacccgtaccttaaaaaacttctgggtcgctttttcggcagggaa
gatgatctgctgatttttcgtgatgcccccgcagcaaaaggaattcaccatgcctatatc
ggtggcctgctcgaacactctctttccatggccagactctgtcatctcctggcggatcat
tacgatggtgtgaaccgttcccttctccttaccggagctctgctccatgatatcggcaaa
ttgaaggaacttcaggcaaatgatggtgtggtggagtatactgtgccaggcaggctgaag
gggcatcttgttatcggttgcgaactggtgggaagaacggcagaacgcataaagaatttt
ccgggagacctgcttgtacagttgcagcatctgattctcagccaccatggtcggcaggaa
ttcggttctcctgttgtgccgatgactgttgaggctatgatactcagttttgttgatgat
cttgacgcgaagatgaacctgatagaacagttgcgtcggaagatgaacagcgaagatatg
gaatggactgaatatcagagaactctcgagaggtatctctaccttggaggtttcaaggaa
aaaactgagcagacagacacgaagaaaaaggatgtcaatcgtcgtcaaccgtctcttttt
cctggaccggaaccagattga

DBGET integrated database retrieval system