Desulfomarina profundi: DGMP_00670
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Entry
DGMP_00670 CDS
T07650
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
dbk
Desulfomarina profundi
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dbk03009
]
DGMP_00670
Enzymes [BR:
dbk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DGMP_00670
Ribosome biogenesis [BR:
dbk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DGMP_00670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
PDZ_Tricorn
DUF7055
Motif
Other DBs
NCBI-ProteinID:
BCL59374
UniProt:
A0A8D5JFX8
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All DBs
Position
complement(68485..69204)
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AA seq
239 aa
AA seq
DB search
MAMNPLRLQKYLAHCGVASRRKCEEFIQAGRVRVDGKIVDQPGVKITPGRHNITFDGQPV
SQKNKHEYYLLNKPAGYVTTLSDPQGRPVVRSLLKNIHTRLFPVGRLDIDTEGALILTND
GQFAQKVQHPSFETNKTYEAVIRGHIKQSTIRLLEKGIMLEKKMTAPAKIRFLSQKGKNS
AIQITIHEGRKRQVRKMFGAVGHPVIHLKRIAYGRLQLRNLPPGQYRKLDGEDLKKVFL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaatccgttaagattacaaaaatatctcgctcactgcggggtagcatcaaga
agaaaatgtgaggaattcatacaggcgggaagagtcagagtcgatggaaaaatagttgat
cagccaggagtaaaaatcactcctggaagacacaatattacttttgacggacaaccggtc
tctcagaaaaacaagcatgaatactatctgcttaataaacctgccggttatgtgacaacg
ctctctgatccccaggggcgacctgttgtcagaagtctgctgaaaaatattcacacccgc
ctttttcccgtcggccgactggatatcgatacggaaggagctcttattctcaccaatgac
ggtcagtttgcccagaaagtgcaacatccgagttttgaaacaaacaaaacctatgaagct
gttatccgcggacatatcaaacaatctacaatcagattgcttgaaaaaggtatcatgctc
gagaaaaaaatgacagctcctgccaaaattcgatttctttctcagaagggaaaaaacagt
gcaatccagatcaccattcatgaaggaagaaaacgccaggtacgaaaaatgttcggggca
gtcggtcatccggttatacatcttaaacgtatagcctacggtcgacttcagctccgcaat
cttcctccgggacaataccgaaagctcgacggggaagacttaaaaaaagtctttttatag
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