KEGG   Desulfomarina profundi: DGMP_03740
Entry
DGMP_03740        CDS       T07650                                 
Symbol
polA
Name
(GenBank) DNA polymerase
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
dbk  Desulfomarina profundi
Pathway
dbk03030  DNA replication
dbk03410  Base excision repair
dbk03420  Nucleotide excision repair
dbk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dbk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DGMP_03740 (polA)
   03410 Base excision repair
    DGMP_03740 (polA)
   03420 Nucleotide excision repair
    DGMP_03740 (polA)
   03440 Homologous recombination
    DGMP_03740 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dbk03032]
    DGMP_03740 (polA)
   03400 DNA repair and recombination proteins [BR:dbk03400]
    DGMP_03740 (polA)
Enzymes [BR:dbk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DGMP_03740 (polA)
DNA replication proteins [BR:dbk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DGMP_03740 (polA)
DNA repair and recombination proteins [BR:dbk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DGMP_03740 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DGMP_03740 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc DNA_pol_A_exo1 HHH_5 DNApol_Exo HHH_2 HHH DNA_polI_exo1 Paf67 IMS_HHH DNA_pol_lambd_f RecR_HhH
Other DBs
NCBI-ProteinID: BCL59681
UniProt: A0A8D5FQQ6
LinkDB
Position
418045..420267
AA seq 740 aa
MKDQTMTREEVEKKYGVPLESLLDTFALMGDSADNIPGIPGVGPKTAEKLISTYGSLEGV
YSNIDSMKKSKMKEKIIAGRDEAYLSRDLIRLKMDVDVPEGPDGYKLQKPDDEKLAAMYG
ELEFTALLKGIDTAKSVPVEGFVIIRSPEQLQEVVENLMEKPVLAIDTETTSLNARNAGL
VGISLAPDLSTAYYIPMGHLGSDGKPRHDQLSGHMVLEVLTPLLLDGKKIIVGHNLKYDL
TVLQRQWNIEPAGKLFDTMIAAYLTESGGRSLKLDDLCRERGVRLTSFSEVVADDKRENS
FAHVDIDRAGMYSCEDVYGALLLFDEFNNLLVEKDLEALFFDVEMEIVSILAVMEIAGIC
IDENVLQKLSSEFSSKLQKLEEEIHFLAGREFNINSPKQLGQILFEELELPHGRKTKTGY
STDVKVLEKLAKKHPLPEKVLRYRTLTKLLTTYVEKLSQLKDPVTGRIHTSFNQAVTATG
RLSSSDPNLQNIPVRSEEGNRIREAFVPEKGLVFLAADYSQIDLRVLAHYSGDRALTQAF
LQGDDIHTRTAAEIFSVSPLLVNVEMRRVAKSINFGIVYGMSSFGLSSQLNISRKEAQRF
IDRYFHLYSGVEEFMVKIVEEAREKGYVTTLLKRRRSVPEIHAKNKIRREFAERMAINTP
IQGTAADIIKLAMIRCDRAIDNAGLSAKMLLQIHDELVFELPEAELEATQSVVKEAMENA
LELAVPLVVNFETGKNLAKS
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgaaagaccagaccatgacaagggaggaggtcgaaaaaaaatacggagttccattggaa
tcgcttcttgatacctttgctcttatgggggacagtgcggataatattccgggaattcca
ggtgtggggccgaaaacagcagagaaacttatctcgacctatggttctcttgagggagtt
tatagcaatatagattccatgaaaaaatccaaaatgaaggaaaaaatcattgccggaaga
gacgaggcctatctctcaagagatttgatacggttgaaaatggatgtcgatgtcccggaa
ggaccggatggatacaaacttcagaaaccggatgatgagaaactcgctgcaatgtatggg
gaactggagtttacagcacttctgaaagggattgatacggcaaaatccgtcccggtcgag
gggtttgtgatcatccggtccccggaacagttgcaggaagtggtggagaatctgatggaa
aaaccggttcttgcaattgatactgagacaacatcactgaatgcaaggaatgcaggactg
gtaggaatctccctggcccctgatctttccacggcgtattatatcccaatgggacatctt
ggaagtgacggaaagccgcgccatgatcaactctccggccacatggttttggaggtactg
acaccattacttcttgatgggaaaaaaataattgtcggtcataatctcaagtatgatctt
actgttcttcagcggcagtggaatattgaaccggcaggcaagctttttgatacgatgatc
gctgcttatctaacagagagtggtgggcgttcattgaaacttgatgatctctgccgggag
cggggcgtacgtctcacctctttttcagaagttgttgccgacgataaacgtgaaaacagt
tttgcccatgtggatatagacagagctggaatgtatagctgtgaagatgtctatggcgca
ttgctgctctttgatgagtttaacaatttgctcgtagaaaaagatcttgaagctctcttt
tttgatgtggaaatggagattgtctctattctggcggtgatggaaatagccggaatatgt
attgatgaaaatgttctgcagaaactatccagtgaattttcttcgaaattgcagaagctt
gaggaagaaatacacttccttgccggacgtgaatttaacattaattctcccaagcagctt
gggcagatactttttgaagaactggaactgccccatggcagaaaaacaaagaccggttat
tccaccgatgtcaaggttctcgaaaaactcgccaaaaaacaccctttgccggaaaaggtg
ctacgttacagaacgctgacaaaactgcttaccacctatgtggaaaaattaagccagttg
aaggatccggttacgggaaggattcatacctctttcaaccaggcagtgacggcaaccggt
cgtctgtccagcagtgatccgaatttgcagaatattcctgttcgaagtgaagagggaaac
cgtattcgtgaagcctttgtgccggaaaaggggctggtttttctggctgctgattattct
cagattgatttgagggttctggcccattactctggagacagggcgttgacccaggcattt
ctacagggcgatgatattcataccagaactgcagcggagattttcagtgtctctcctttg
cttgtgaacgtggaaatgcggcgggttgcaaaaagtattaatttcggcattgtgtatgga
atgagcagttttggtctatccagtcagctgaatatcagcagaaaggaagcacagcggttt
attgatcgctattttcatctctattcaggtgttgaagaatttatggtgaaaatagtggag
gaggccagggaaaaggggtatgtaacaacattgcttaagcggcggagatcagttccggaa
attcatgccaagaataaaataagacgggaatttgctgaacgaatggcaatcaatacgccg
atacagggaacagcggcggatattatcaagttggcaatgatcagatgtgacagggccatc
gacaatgccggattgtcggcaaagatgttgctgcagattcacgatgagcttgtttttgag
ttgccagaagcagaactggaagcaacacaatccgtggtgaaagaggctatggaaaatgcc
ttggagcttgctgttccgctggttgtcaactttgaaacgggaaaaaatctggcaaaatca
tag

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