Desulfomarina profundi: DGMP_03740
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Entry
DGMP_03740 CDS
T07650
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dbk
Desulfomarina profundi
Pathway
dbk03030
DNA replication
dbk03410
Base excision repair
dbk03420
Nucleotide excision repair
dbk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DGMP_03740 (polA)
03410 Base excision repair
DGMP_03740 (polA)
03420 Nucleotide excision repair
DGMP_03740 (polA)
03440 Homologous recombination
DGMP_03740 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dbk03032
]
DGMP_03740 (polA)
03400 DNA repair and recombination proteins [BR:
dbk03400
]
DGMP_03740 (polA)
Enzymes [BR:
dbk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DGMP_03740 (polA)
DNA replication proteins [BR:
dbk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DGMP_03740 (polA)
DNA repair and recombination proteins [BR:
dbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DGMP_03740 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DGMP_03740 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNApol_Exo
HHH_2
HHH
DNA_polI_exo1
Paf67
IMS_HHH
DNA_pol_lambd_f
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
BCL59681
UniProt:
A0A8D5FQQ6
LinkDB
All DBs
Position
418045..420267
Genome browser
AA seq
740 aa
AA seq
DB search
MKDQTMTREEVEKKYGVPLESLLDTFALMGDSADNIPGIPGVGPKTAEKLISTYGSLEGV
YSNIDSMKKSKMKEKIIAGRDEAYLSRDLIRLKMDVDVPEGPDGYKLQKPDDEKLAAMYG
ELEFTALLKGIDTAKSVPVEGFVIIRSPEQLQEVVENLMEKPVLAIDTETTSLNARNAGL
VGISLAPDLSTAYYIPMGHLGSDGKPRHDQLSGHMVLEVLTPLLLDGKKIIVGHNLKYDL
TVLQRQWNIEPAGKLFDTMIAAYLTESGGRSLKLDDLCRERGVRLTSFSEVVADDKRENS
FAHVDIDRAGMYSCEDVYGALLLFDEFNNLLVEKDLEALFFDVEMEIVSILAVMEIAGIC
IDENVLQKLSSEFSSKLQKLEEEIHFLAGREFNINSPKQLGQILFEELELPHGRKTKTGY
STDVKVLEKLAKKHPLPEKVLRYRTLTKLLTTYVEKLSQLKDPVTGRIHTSFNQAVTATG
RLSSSDPNLQNIPVRSEEGNRIREAFVPEKGLVFLAADYSQIDLRVLAHYSGDRALTQAF
LQGDDIHTRTAAEIFSVSPLLVNVEMRRVAKSINFGIVYGMSSFGLSSQLNISRKEAQRF
IDRYFHLYSGVEEFMVKIVEEAREKGYVTTLLKRRRSVPEIHAKNKIRREFAERMAINTP
IQGTAADIIKLAMIRCDRAIDNAGLSAKMLLQIHDELVFELPEAELEATQSVVKEAMENA
LELAVPLVVNFETGKNLAKS
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaccagaccatgacaagggaggaggtcgaaaaaaaatacggagttccattggaa
tcgcttcttgatacctttgctcttatgggggacagtgcggataatattccgggaattcca
ggtgtggggccgaaaacagcagagaaacttatctcgacctatggttctcttgagggagtt
tatagcaatatagattccatgaaaaaatccaaaatgaaggaaaaaatcattgccggaaga
gacgaggcctatctctcaagagatttgatacggttgaaaatggatgtcgatgtcccggaa
ggaccggatggatacaaacttcagaaaccggatgatgagaaactcgctgcaatgtatggg
gaactggagtttacagcacttctgaaagggattgatacggcaaaatccgtcccggtcgag
gggtttgtgatcatccggtccccggaacagttgcaggaagtggtggagaatctgatggaa
aaaccggttcttgcaattgatactgagacaacatcactgaatgcaaggaatgcaggactg
gtaggaatctccctggcccctgatctttccacggcgtattatatcccaatgggacatctt
ggaagtgacggaaagccgcgccatgatcaactctccggccacatggttttggaggtactg
acaccattacttcttgatgggaaaaaaataattgtcggtcataatctcaagtatgatctt
actgttcttcagcggcagtggaatattgaaccggcaggcaagctttttgatacgatgatc
gctgcttatctaacagagagtggtgggcgttcattgaaacttgatgatctctgccgggag
cggggcgtacgtctcacctctttttcagaagttgttgccgacgataaacgtgaaaacagt
tttgcccatgtggatatagacagagctggaatgtatagctgtgaagatgtctatggcgca
ttgctgctctttgatgagtttaacaatttgctcgtagaaaaagatcttgaagctctcttt
tttgatgtggaaatggagattgtctctattctggcggtgatggaaatagccggaatatgt
attgatgaaaatgttctgcagaaactatccagtgaattttcttcgaaattgcagaagctt
gaggaagaaatacacttccttgccggacgtgaatttaacattaattctcccaagcagctt
gggcagatactttttgaagaactggaactgccccatggcagaaaaacaaagaccggttat
tccaccgatgtcaaggttctcgaaaaactcgccaaaaaacaccctttgccggaaaaggtg
ctacgttacagaacgctgacaaaactgcttaccacctatgtggaaaaattaagccagttg
aaggatccggttacgggaaggattcatacctctttcaaccaggcagtgacggcaaccggt
cgtctgtccagcagtgatccgaatttgcagaatattcctgttcgaagtgaagagggaaac
cgtattcgtgaagcctttgtgccggaaaaggggctggtttttctggctgctgattattct
cagattgatttgagggttctggcccattactctggagacagggcgttgacccaggcattt
ctacagggcgatgatattcataccagaactgcagcggagattttcagtgtctctcctttg
cttgtgaacgtggaaatgcggcgggttgcaaaaagtattaatttcggcattgtgtatgga
atgagcagttttggtctatccagtcagctgaatatcagcagaaaggaagcacagcggttt
attgatcgctattttcatctctattcaggtgttgaagaatttatggtgaaaatagtggag
gaggccagggaaaaggggtatgtaacaacattgcttaagcggcggagatcagttccggaa
attcatgccaagaataaaataagacgggaatttgctgaacgaatggcaatcaatacgccg
atacagggaacagcggcggatattatcaagttggcaatgatcagatgtgacagggccatc
gacaatgccggattgtcggcaaagatgttgctgcagattcacgatgagcttgtttttgag
ttgccagaagcagaactggaagcaacacaatccgtggtgaaagaggctatggaaaatgcc
ttggagcttgctgttccgctggttgtcaactttgaaacgggaaaaaatctggcaaaatca
tag
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