Desulfomarina profundi: DGMP_08440
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Entry
DGMP_08440 CDS
T07650
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
dbk
Desulfomarina profundi
Pathway
dbk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DGMP_08440 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dbk03400
]
DGMP_08440 (uvrB)
DNA repair and recombination proteins [BR:
dbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DGMP_08440 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DGMP_08440 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
Swi5
Kinesin
Motif
Other DBs
NCBI-ProteinID:
BCL60151
UniProt:
A0A8D5FGD8
LinkDB
All DBs
Position
901328..903343
Genome browser
AA seq
671 aa
AA seq
DB search
MENSFQLVSQFSLSGDQPDAVAQLAQGVEKGAKSQVLLGVTGSGKTFTIANVIQRVQRPS
LVIAPNKTLAAQLFGEFRELFPHNAVEYFVSYYDYYQPEAYIPQSDSYIEKDSSINDAID
KMRHSATRSLLTRRDVLIVASVSCIYGLGSPEEYKNMHLFLRTGEDYPPEDVQRRLVFMQ
YERNDVSFHRGTFRVRGDVTDIFPAHEEDRAVRLEFFGDTLDAITVIDSLTGAVLERLDE
YTVFPGSHFVTSKDRLQIANRTIKEELQERLQFFQNENRLVEGQRLEQRTMFDLEMIREL
GYCTGIENYSRHLTGKPPGAPPPNLLDYFPEDYLLFIDESHIGIGQLNGMYNGDRSRKTT
LVDYGFRLPSALDNRPLRFDEFEKRINQVIYVSATPGPYELKQVGGEVVEQVIRPTGLLD
PRIEVRPAVNQVDDLLEEIRLRTERGEAVLVTTLTKRMAEDLTDYYENLDIRVRYLHSDI
KTLERVELIRELRNGEFNVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLVQTCG
RAARNVDGLVIMYADEITGAMKYTIEETERRRKIQQEYNRKNNITPRTIISPVKNSMQEH
LQASGYPADDYNHLLQAAEEIPEYYSVKDLEKEIDRLETEMHEAAAELAFERAAELRDHI
KTLRMLEIELG
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagaattcttttcagcttgtatcacagttttcactctccggtgatcagccggatgct
gttgcgcaactggcacagggtgtggaaaaaggagccaaaagccaggtgcttctcggggtt
accggttccggcaagacttttaccatcgccaatgtcattcagcgtgtacagcggccttcc
ctggtcattgctccgaacaagaccctggcagcccagctgtttggtgaattcagggaactc
tttccccacaatgccgtggaatattttgtatcctactacgattactaccagcccgaagcg
tatattccccagtcggacagttatatagaaaaagactcttcaatcaatgatgccattgac
aaaatgcgccattctgccacacgttctctgctcactcggcgtgatgtgctgattgttgcc
tctgtgtcatgtatttacggcctgggttctcccgaagaatataaaaacatgcatctgttt
ctgcggaccggggaagattatcctccggaagatgtccagcgtcgcctggttttcatgcaa
tatgaacgtaatgatgtctcttttcacaggggaacttttcgggttcgaggagatgtgact
gatatttttccggcccatgaggaggatcgggctgtgcgtcttgagttcttcggtgataca
cttgatgctattacggtgattgattccctgacgggggcagtgcttgagaggcttgatgaa
tatactgtttttcccggcagtcattttgttacctcaaaggacaggctgcagattgccaac
cggaccatcaaggaggaactgcaggagcggctgcagtttttccagaatgaaaatcgtctg
gtggagggccagcgtctggaacaacggaccatgttcgatcttgaaatgatccgggagctg
gggtattgcaccggtatcgaaaactacagcagacatctgaccggaaaacctccaggggca
cctccgcccaacctgctcgactattttcccgaggattatctgcttttcattgatgagagt
catatcggtatcggccagctgaacggcatgtataacggagacagatcccgtaaaaccacc
cttgttgactacggttttcgtcttccttccgctctggacaatcgcccgctgcgttttgat
gaatttgaaaagcgtatcaaccaggtgatttatgtctccgcaacacctggaccttatgag
ttgaagcaggtggggggggaagtggtggaacaggttatccgcccgaccggccttcttgat
ccgagaatcgaggtgagaccggccgtcaaccaggttgatgatctgctggaagaaattcgc
ctgcggacggaacggggtgaagcggttctggtgaccaccctgaccaaaaggatggctgag
gatctcaccgattattatgagaatctggatatccgtgtgcggtacctccattcggacata
aaaaccctggaacgggttgaactgatacgtgaactccgaaacggtgaattcaatgtgctg
gtcggtatcaacctgttgcgggaagggctcgatattcccgaggtatctctggttgctatc
ctggacgctgataaggaagggtttctccgttccgagagatctcttgttcagacctgcggt
cgggctgcgagaaatgttgatgggcttgtaatcatgtacgccgatgagattaccggcgcc
atgaaatataccattgaagagacggagaggcgtcgaaaaatacagcaggagtacaataga
aaaaacaatattacgccaagaaccattatttccccggtgaaaaacagtatgcaggagcat
ctgcaggcatcggggtaccctgccgatgattacaatcatctgttgcaggcagccgaggag
atacctgaatattattccgtaaaggatctggaaaaggaaatcgacagactggagacggag
atgcatgaagcggccgcggaactggcatttgaaagggccgcggaattacgggatcacata
aaaacgttgagaatgctggagatagaattgggatga
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