Desulfomarina profundi: DGMP_10370
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Entry
DGMP_10370 CDS
T07650
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dbk
Desulfomarina profundi
Pathway
dbk00521
Streptomycin biosynthesis
dbk00523
Polyketide sugar unit biosynthesis
dbk00525
Acarbose and validamycin biosynthesis
dbk00541
Biosynthesis of various nucleotide sugars
dbk01100
Metabolic pathways
dbk01110
Biosynthesis of secondary metabolites
dbk01250
Biosynthesis of nucleotide sugars
Module
dbk_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DGMP_10370 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DGMP_10370 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
DGMP_10370 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DGMP_10370 (rmlB)
00525 Acarbose and validamycin biosynthesis
DGMP_10370 (rmlB)
Enzymes [BR:
dbk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DGMP_10370 (rmlB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
BCL60344
UniProt:
A0A8D5FLD0
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All DBs
Position
1111990..1113060
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AA seq
356 aa
AA seq
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METKRTLLVTGGCGFIGANFVRLVNRQFPHWRVVNLDKLTYAGNLKNLQGLEEGANYRFL
RGDICDGEMMELIFREERIDTVVHFAAESHVDRSITGPQSFIQTNIVGTFTLLEAARKYW
LNGDRKKECCFLHVSTDEVYGSLGETGYFTEETPFDPRSPYSASKASSDHLVKAYFHTYG
LPVKITNCSNNYGPYQFPEKLIPLVFNNGMKGKSLPVYGDGKNVRDWLYVQDHCEAIIEV
VRKGKTGQCYNIGGNNEKQNLEVVTLICDILDSKLGRPVNGKPRRSLITFVKDRLGHDRR
YAIDASRIKDELGWEPKVSFEEGMEKTVDWYLANQTWVDEIVDGSYQQYYEKMYTV
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaaacgaacacttcttgtgaccggtggttgtggttttatcggcgcaaatttt
gtgcggcttgtcaatcgacagtttccccattggcgggttgtgaatctcgataagctgacc
tatgccggaaacctcaaaaatctgcagggacttgaagaaggggcgaattatcgatttctc
aggggagatatctgtgacggggagatgatggagctgattttcagagaggagagaattgat
accgtcgttcattttgccgccgaatcccatgtcgacaggtcaattacggggccccagtcc
tttattcagaccaatattgtcggaacatttaccctgttggaggcggccaggaaatactgg
ctcaatggtgacagaaagaaggaatgttgttttcttcatgtgagtaccgacgaggtttat
ggatctctcggagaaacagggtattttacggaggagacaccttttgatccccgctctccc
tattcggcttcaaaggcgtcttcagaccacctggtcaaagcctatttccacacttacggc
ctgccagtaaagattacaaactgctcaaataattacggcccctaccagttcccggaaaag
cttattccccttgtgttcaataacggtatgaaggggaaatccctcccggtatacggagat
ggaaaaaatgtgcgggactggctttatgtgcaggatcattgtgaagccattattgaggtc
gtacgaaagggaaaaacagggcagtgttataatatcggcgggaacaatgaaaagcagaac
ctggaagttgttaccctgatctgtgacattctcgacagcaaacttgggcggcctgtcaac
gggaagccgcgcagatccctgatcacttttgttaaagacaggctcgggcacgacagaaga
tacgccatagatgcttccagaataaaggatgagctgggctgggagccgaaggtcagtttc
gaagaaggaatggaaaaaacagttgactggtacctggctaatcagacgtgggttgatgag
attgtggatggttcttatcagcaatattacgaaaagatgtatactgtgtga
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