Desulfomarina profundi: DGMP_10960
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Entry
DGMP_10960 CDS
T07650
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dbk
Desulfomarina profundi
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dbk03016
]
DGMP_10960 (rnd)
Enzymes [BR:
dbk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DGMP_10960 (rnd)
Transfer RNA biogenesis [BR:
dbk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DGMP_10960 (rnd)
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BCL60403
UniProt:
A0A8D5FFJ9
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All DBs
Position
complement(1175262..1176395)
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AA seq
377 aa
AA seq
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MEKLDTLIQNNNNLQKLVQLAKQTDAIALDTEFVWERTYFPQLGLIQIALSDEDCYLIDP
CAIKDLSPFGQLLADRSIVKIFHDAPQDLVILHRATGAVPQNIFDTRLAAGFSNLPATLS
LCNLARELLDITISKTETRTNWMQRPLSSEQIAYGLNDVRYLRAIRVILLTRIIGPKIKA
WLQEELNLLNNPATYSGPPLDKKFRKIRGSGSLDRLGLAVLKNLTIWRETTARKLNRPRG
HIIKDTVLLELARQRPRTVDMLREVGILSANAFKKYGKTISAVTDETCRQDPSSFPSVKR
SIRLNIRQKKTYEKLNNLIALKCELLGIAPPLVGTSAELKQVVKMLSSNGKMAGNAQLRQ
TGGWRKTLLEDFFKQNI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactcgacaccctgattcagaacaacaataatctgcaaaaactggtgcaactg
gcgaaacaaactgacgccattgcactggatacggaatttgtctgggaacggacatatttc
ccccagttgggccttatccagattgccctctcggatgaagactgctatcttattgacccc
tgcgccataaaagatttgtcacctttcgggcaactgctggcggacagaagcattgtgaaa
atttttcatgatgctccccaggatctcgtaatactccacagggcaacaggtgcagttccc
cagaatatttttgacaccaggctggccgcaggtttttccaatcttccagccacactctcc
ctctgcaatcttgccagagagctccttgatataacaatttccaaaaccgaaacccgaaca
aactggatgcaacggcctctcagttccgagcagattgcctatggcctcaacgatgttcgc
tatctcagggcaatcagggttattctcctgacccggatcattggtcctaaaatcaaagcg
tggcttcaggaagaactcaatctcctgaacaatccagctacatattcaggaccgccactg
gataaaaaatttagaaaaataaggggttccggcagtctggacaggcttggcctggctgta
ttgaaaaatctgacaatctggcgggaaaccaccgccagaaagctgaacagaccgaggggg
cacattataaaagacacggttcttcttgaactggccagacaacgacctcgaactgttgat
atgctccgtgaggtcgggattctttcagctaatgcttttaaaaaatacggcaaaaccatt
agtgcagtaaccgatgaaacctgcaggcaggatccttcatcttttccctcagtcaaacgt
tctatacgtttgaacataagacagaaaaaaacctatgaaaagctgaacaacctcattgca
ttgaaatgtgaacttctgggcatagcacctccccttgtcggtaccagcgccgaattgaaa
caggtggttaaaatgctcagcagcaacggcaagatggcaggaaatgctcagttaagacag
accggaggttggcgaaaaactcttcttgaggatttctttaaacaaaacatataa
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