Desulfomarina profundi: DGMP_11590
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Entry
DGMP_11590 CDS
T07650
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dbk
Desulfomarina profundi
Pathway
dbk03030
DNA replication
dbk03430
Mismatch repair
dbk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DGMP_11590 (dnaX)
03430 Mismatch repair
DGMP_11590 (dnaX)
03440 Homologous recombination
DGMP_11590 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dbk03032
]
DGMP_11590 (dnaX)
03400 DNA repair and recombination proteins [BR:
dbk03400
]
DGMP_11590 (dnaX)
Enzymes [BR:
dbk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DGMP_11590 (dnaX)
DNA replication proteins [BR:
dbk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DGMP_11590 (dnaX)
DNA repair and recombination proteins [BR:
dbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DGMP_11590 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_5
TIP49
AAA_22
AAA_14
AAA_16
TsaE
AAA_18
AAA_30
PIF1
AAA_2
AAA_19
Mg_chelatase
nSTAND6
nSTAND3
AAA_lid_RFC1
DUF815
RNA_helicase
Viral_helicase1
DUF3537
Motif
Other DBs
NCBI-ProteinID:
BCL60466
UniProt:
A0A8D5FH05
LinkDB
All DBs
Position
complement(1234903..1236630)
Genome browser
AA seq
575 aa
AA seq
DB search
MSYLVLARKSRPQTFDQVIGQRSVVKTLQNSIARRRVAHAILFSGVRGVGKTTLARIMAK
ALNCQSEVSNPPCDDCTSCREISAGSSIDLYEIDGASNRGIQEIRELKEKLRFLPTSARY
KIFIIDEVHMLTTEAFNALLKTLEEPPEHVYFMFATTEIHKIPITILSRCQQYELKRISA
EELSDHFRKLADEEGFEIEPAALSLIVREAEGSVRDGLSLLDQMFSFGEKTISKDDVIEL
LGLIDRDLLMTVARGLLDGNTGDVLCALEDIFNYSIDIKRFLIDLIDQFRALLFSKIDGC
AKLIDLPENELAELKNIAADYHPETLHQKLGMLMATMEDIRNSSHPRLALETSFLKIIEA
GNVVAVSTLLGQVDKILAGLPVSDPPPPVTEKLSAETPESQATPETDVENVEIIPPKAQV
SPPPAAIAEKPRKEPKPEPEKPQVQPHTRDIRKDWLEFIDYVRERKLWMAQNLEQADSAK
QVDGELHLSYSKPAKCMVLRQKENLKQLSEFVLDFFQQSIKIRFIVPDKELDDRDANGES
PRRKRRELADDPLVIMAAEIFNGQVGNIRIGPRSR
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcttgttcttgcaagaaaatcccgcccccagacctttgaccaggttataggc
cagcgctccgtcgtgaagacgttgcaaaacagtattgccaggagaagagtcgcccatgcc
atcctgttctccggagtacgcggtgtcggcaaaaccacactggcccggatcatggcaaag
gcgctcaactgccagtccgaagtaagcaaccctccctgcgatgactgtacctcctgtcgt
gaaatttcggcaggcagttccattgacctgtacgaaattgacggggcctcaaaccgcggt
attcaggagatcagggagctgaaggaaaaactgcgattcctccccacttccgccaggtac
aagatatttataattgacgaagtacacatgctgacaacagaggcctttaacgccctgttg
aaaaccctggaagaaccgccggagcatgtctatttcatgttcgccacaacggagatccac
aagatccccattaccattctctcccgctgccagcagtatgagttaaaacgtatatcggca
gaagagctgtccgatcatttccgtaaacttgccgacgaagaggggtttgaaattgagccc
gccgcactttctcttattgtccgtgaagcagaaggatccgtcagggacggattgagcctg
cttgaccagatgttttcctttggtgaaaaaacaatcagcaaggatgatgtcattgagctg
ctgggcctcatcgaccgagaccttctcatgacggtggcccgcggcctccttgacggcaat
accggagacgttctttgcgcccttgaggatatttttaattattcaattgatatcaaacgc
tttctgatcgacctcattgaccagttccgggccctgcttttctcaaagattgacggctgc
gccaagcttatcgaccttccggagaacgagcttgccgagttgaagaatattgcggcagat
tatcacccggaaacactgcatcagaaactgggcatgctcatggcaaccatggaggacatc
cgcaattccagccatccgcgcctcgcccttgaaacctctttcctgaaaataattgaagcg
ggaaacgttgttgcagtctccaccttgcttgggcaagtggataaaattctggcaggtctc
cccgtctccgaccctcccccgccagtcactgagaaactctcagcagaaacaccggaatca
caggctacaccagaaacagacgtcgaaaacgttgaaattataccaccgaaggcgcaggta
tcacctcctcctgctgccattgctgaaaaaccccgaaaagaacccaaacctgaacccgag
aaaccgcaggttcaaccccataccagagatatccgtaaagactggctggagtttattgat
tacgtcagggagagaaaactctggatggcgcaaaatcttgaacaggccgactccgcaaaa
caggtggacggtgaactgcacctgagctacagcaaaccagcgaagtgtatggttctcagg
caaaaggaaaatctgaaacagctttccgagtttgttctcgatttttttcagcaatcaatc
aagatacgttttatagtacctgataaggagctggacgatagagacgctaatggagaatct
ccccgacgtaagcggagagagcttgcagacgatcccctggtcatcatggcggcggaaatc
ttcaatggccaggtaggaaatatcagaataggaccaagaagcaggtga
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