Desulfomarina profundi: DGMP_12830
Help
Entry
DGMP_12830 CDS
T07650
Symbol
fliA
Name
(GenBank) DNA-directed RNA polymerase sigma-70 factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
dbk
Desulfomarina profundi
Pathway
dbk02020
Two-component system
dbk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DGMP_12830 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DGMP_12830 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dbk03021
]
DGMP_12830 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dbk02035
]
DGMP_12830 (fliA)
Transcription machinery [BR:
dbk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DGMP_12830 (fliA)
Bacterial motility proteins [BR:
dbk02035
]
Flagellar system
Flagellar assembly proteins
Stator
DGMP_12830 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_r2
PAC_bac
GerE
wHTH-PRTase_assc
PhyR_sigma-like
UPF0122
HTH_24
UPF0175
DUF7343
MarR_2
HTH_37
Motif
Other DBs
NCBI-ProteinID:
BCL60590
UniProt:
A0A8D5JNW3
LinkDB
All DBs
Position
complement(1386196..1386927)
Genome browser
AA seq
243 aa
AA seq
DB search
MLYNQNPHNNDRSRLIRDNLYLVDIIVGRMVTQVPSFMNRDDMKSAGMVGLLDASNKFDP
SKKILFKTFAEYRIRGAILDEMRKLDWFSRSLRDKQNRIGKTIADLELQLGRDPEDHEVA
RAMNLSLEEYQSMLGEVSHLGCVSLNETLDHTVEGRSFLETLVDQRTSALPGKRIEDQEL
TKKLAEIIGQLSKKEQLVISLYYYEELTQKEIAEILELSEGRVSQLHSQALIKLRNKVEA
RLH
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgctctataaccaaaatcctcataataacgacagatcccgccttatccgggacaacctt
tacctggttgacattattgtcggcagaatggtcacccaggtgccctcctttatgaacagg
gatgacatgaaaagtgccggcatggttggactgctggacgcctcaaataaatttgatcca
agcaaaaaaatattattcaaaacctttgccgagtatagaatcagaggtgccattcttgat
gaaatgagaaaacttgactggttttcccgctccctgagagacaaacagaacagaatcggg
aaaacaattgctgacctcgaactgcaactgggaagagacccggaggaccacgaagttgcc
agggcaatgaatctttccctggaagagtatcagtcaatgcttggggaagtgagccacctg
ggctgcgtcagcctgaatgaaacgctcgatcataccgtcgaagggagatcctttcttgaa
acacttgttgaccagcgaaccagtgctctccccggaaaaagaattgaagaccaggaattg
acgaaaaagctggcggaaatcataggacaattatctaaaaaagaacaactggtcatctcc
ctgtactactatgaagagctgacccagaaggagatagctgaaatcctggagctgtcggag
ggccgggtctcccagctgcacagccaggccctgataaaactcagaaacaaagtcgaagcc
agactccactga
DBGET
integrated database retrieval system
