Desulfomarina profundi: DGMP_13940
Help
Entry
DGMP_13940 CDS
T07650
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
dbk
Desulfomarina profundi
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dbk03021
]
DGMP_13940
Transcription machinery [BR:
dbk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DGMP_13940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UPF0122
PF0095-like_C
HTH_11
GntR
Motif
Other DBs
NCBI-ProteinID:
BCL60701
UniProt:
A0A8D5FSQ3
LinkDB
All DBs
Position
1503004..1503981
Genome browser
AA seq
325 aa
AA seq
DB search
MSKVTKTDQAQKSAEKGYENPLVAVSDEENLPALSNPALHRYLQEISQYELLTREETDEL
AIRFREEGDQDAAYRLVSSNLRLVVKVAMDFQKYWMQNFMDLIQEGNVGLVQATKKFDPY
RGVKFSYYAAYWIRAYVLKFIMDNWRLVKIGTTQAQRKLFFSLNKERKLLEAQGFQAEPK
LLAERLNVKEKEVIEMGQRMDNWDVSLESPVRSDSDDEQKNFLPSNGPGIESTVAGKEIK
VKLAELLDILKDRLNDKERMILEKRLLTDEPLTLQNIADKFAISRERVRQIEVNLLKKMK
KYLEAEMPDIVDYFDGEKIVIHSDR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagttacaaaaactgatcaagcccaaaaaagcgcagaaaaagggtatgaaaac
cccctggttgccgtatcggatgaagaaaatctaccggcactcagcaatccggctctgcac
aggtatttgcaggagatcagtcaatatgagttactgaccagagaagaaaccgatgagctt
gccatacgattcagggaggagggagaccaggatgcagcttaccgtcttgtgtcctcaaat
cttcggctggtggtcaaagttgccatggatttccagaaatattggatgcagaatttcatg
gatctaatccaggaaggaaatgtcgggctcgtccaggctacaaaaaaatttgatccctac
cggggtgtaaaattttcctactatgctgcatactggatcagggcctacgttctcaagttt
atcatggacaactggaggctggtgaagatcggcacgacccaggcacagcggaaactgttt
ttcagcctgaataaggaaagaaaactgcttgaagcacaggggtttcaggcggaacccaag
ttgctcgctgaaaggttaaatgttaaggaaaaggaagtcatagaaatgggtcagcgaatg
gacaactgggatgtctccctggaaagtccggttcgttccgactctgacgatgaacagaaa
aactttctccccagcaacggtccgggaattgaatcaactgttgcaggtaaagagattaag
gtgaaacttgcagaacttctcgatatcttaaaagatagattgaatgacaaggagaggatg
attctggaaaaaaggttgttgacggatgaaccgttgaccttgcagaatattgcagacaaa
tttgccatatcccgggaaagagtacgacagattgaagtcaacctgcttaaaaagatgaaa
aaatatcttgaggcggaaatgcctgatatcgtagattattttgatggtgagaaaattgtt
atccactccgatcgttaa
DBGET
integrated database retrieval system
