Desulfomarina profundi: DGMP_15740
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Entry
DGMP_15740 CDS
T07650
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dbk
Desulfomarina profundi
Pathway
dbk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DGMP_15740 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dbk03400
]
DGMP_15740 (priA)
Enzymes [BR:
dbk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DGMP_15740 (priA)
DNA repair and recombination proteins [BR:
dbk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DGMP_15740 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_16
AAA_22
Cas12f1-like_TNB
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BCL60881
UniProt:
A0A8D5FT17
LinkDB
All DBs
Position
complement(1697003..1699501)
Genome browser
AA seq
832 aa
AA seq
DB search
MHIEVAVAAPLRGSLTYSCPAEDETPGSGKDGSFFIGRRVLVPLGRRKVTGYVLSTGLEE
EKDFVVKRITKFLDEKPLFHANMVPFFKWVAEYYHYPPGLVIKAALPAGLAPKSVKQLVA
GKNVAELRTISQQLESWGRELLDNGVISGAETKKLLKDTVTGREIRKHIRKKRILVRETV
ETDSIREKYETCCKIDSAARDKIEQVFSEEETDFGSLQKQYSVALGITLKLSESKVLFYL
QKLCKQSNHTMVPFRDLKKHYPSAARPLKSLVGNGIVIKADLRVYRNPFGEQLSFFPRPG
ELTSEQSRVLEQLLPSIRSKKFTPFLLHGVTGCGKTEVYLRAAEETLAMGRDVLVLVPEI
ALATQLEAHFVSRFGDQVVLQHSGLTKAERFDQYHKALSGKARIVVGARSALFAPLPDPG
LIVVDEEHDTGFKQDDSFRYHGRDMAVVRARNHDAVVILGSATPSITSYANSVSGKYTLL
SMKKRVADKPLPEVTIVDLNRDTGKKKGKKGIIRSELRARLKQNLQMKNQSILLLNRRGF
STSLICRDCGTPVQCSHCNVSLTLHKNRDHLLCHYCGFSLSAKTVCFECRSMDLVPAGFG
IERVEEEVRGLFPEAVVARIDSDTTADRRQFLRLLRKMQDGDIDILIGTQMVAKGHHFPG
VTLVGIVWADGGLSMPDFRAAEKTFQLITQVTGRAGRGKKSGEVIIQTMRPDHYAILYAQ
QHQYELLYQQEMQLRRSPAFPPHVRLVAVRIEGRVEQEVQKTAIMTGRFLRAGAEKHNTG
LVVLGPAPAPLDKIKDRYRWQLLLKGKNSDELHDMVVHLDKEKADLLSGDVG
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgcatattgaagtagcggttgcggctcccctgcgggggagtctgacgtacagctgtccg
gctgaagacgaaactcccggctctggaaaagacgggagtttttttattggcagaagagtg
ttggtccccctggggagaaggaaagtgaccgggtatgttctttccactggcctggaagaa
gaaaaggattttgtcgtaaaaagaattacaaaatttcttgacgagaaaccactgtttcac
gccaacatggttcctttttttaaatgggttgcggaatattatcattatcctccaggtctg
gtcataaaggccgctctgcctgcgggtcttgctccgaaatcagtgaaacagcttgttgcc
ggtaaaaatgtggcagaactgagaaccatttcccagcaactggaatcctggggccgggaa
ttactggataatggagtgatcagcggggccgaaacaaaaaagttacttaaagatacggta
accgggagggagattcgaaaacatatcaggaaaaagagaatactggtcagggagactgtg
gaaacggacagtataagggaaaaatatgaaacatgttgtaaaatagactctgctgcaaga
gataaaattgaacaggtgttttcagaggaagagactgactttggttcgcttcaaaaacaa
tacagtgttgcccttgggatcactctgaaactttcggaatcaaaggtactgttttatctt
cagaaactttgtaagcagagcaatcacacaatggttcctttcagggatctcaagaagcat
tatccctcggcagccagaccgttgaaatccctggtcggcaatggaattgtcattaaggcg
gatttgcgggtttacagaaatccctttggtgaacaactcagttttttcccccgccctggc
gaactcacctctgaacaatcccgcgtacttgaacaacttcttccttcgatccgttcaaaa
aaatttactcccttccttttacatggtgtgacgggttgcggcaaaacggaggtgtatctg
agagcagcggaagagactctggctatggggagggatgtgctggttcttgtgccggaaatt
gctctggcaacccagcttgaagcacattttgtctcccggtttggcgatcaggttgttctg
cagcattccggattaaccaaagcggagagatttgatcagtatcacaaggcactttccgga
aaggcacgcatagttgttggtgcccggtcggctctttttgcccctcttccggatcccgga
ctcatagtcgttgacgaggaacatgataccggcttcaaacaggatgacagttttcgatat
cacggaagagatatggctgttgtccgtgccagaaaccacgatgcagtggttattcttgga
tcggcaactccttccattaccagttatgccaacagcgtttccgggaaatacaccttgctg
agcatgaaaaaaagagtggctgacaaacctcttcccgaagtgaccattgttgatctgaac
agggataccggaaagaaaaaaggaaaaaaaggtattatacgatcggaactgagagcgcgg
ctgaaacagaatttacaaatgaaaaaccagagcatcctgctgctcaacagaagagggttt
tccacatcacttatctgcagggattgcggaacgccggttcagtgcagtcattgcaatgta
tcattgactcttcataaaaacagggatcatctgctctgtcattattgcggtttttccctg
tcggcaaagaccgtctgttttgagtgcagatcaatggatcttgttccggcaggatttggt
attgagagggtcgaggaggaggtgagggggctgtttcctgaagctgttgtggcccgtatc
gattcagatacaactgcagacagaagacaattcctgagactcctgagaaaaatgcaggat
ggtgatattgatattcttattggaacccagatggttgccaaaggccatcactttccagga
gtgaccctggttggtatcgtctgggctgatggtggactgtccatgccagatttccgggcc
gctgaaaaaacattccagctgataacacaggttacaggcagggcgggtcggggtaaaaaa
tccggcgaagttattatccagaccatgcggccagatcattatgctattctttatgcacaa
cagcaccagtatgaattactgtatcagcaggagatgcagttacggcgctctcctgccttc
ccacctcatgtccgcctggttgctgttcgaattgagggaagggtggaacaggaagtgcag
aaaacagccataatgaccggacgtttcctgagagcaggtgcagagaaacacaatacagga
ctggttgttctaggaccggctccggcaccacttgacaagataaaggacaggtatcgctgg
cagttattgctcaaagggaaaaacagtgatgaactccatgacatggtggttcacctggat
aaggagaaggctgatctgctttcgggggatgtcggctga
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