KEGG   Desulfomarina profundi: DGMP_16740
Entry
DGMP_16740        CDS       T07650                                 
Name
(GenBank) hypothetical protein
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
dbk  Desulfomarina profundi
Pathway
dbk03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dbk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DGMP_16740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dbk03021]
    DGMP_16740
   03400 DNA repair and recombination proteins [BR:dbk03400]
    DGMP_16740
Enzymes [BR:dbk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     DGMP_16740
Transcription machinery [BR:dbk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     DGMP_16740
DNA repair and recombination proteins [BR:dbk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      DGMP_16740
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: BCL60981
UniProt: A0A8D5JRE9
LinkDB
Position
complement(1803125..1803400)
AA seq 91 aa
MARITCEDCLAQIGDDNRFNLIHLTVKRVKQHRQGEPFLVEGKNKEIVMTLREIAAGKVT
FENIDILPDLMDGGDSGAVEGDVKEVDTVPA
NT seq 276 nt   +upstreamnt  +downstreamnt
atggctagaattacttgtgaagattgtctggcacagattggagatgacaacagatttaac
ctgattcatcttacggtgaaacgtgtcaagcagcatcgtcagggagaaccgtttctcgtg
gaagggaagaacaaggaaattgtaatgactcttcgtgaaattgctgcgggaaaagtgact
tttgagaacattgacatcctgcctgatttgatggatggaggtgattccggggcagtggaa
ggtgatgtcaaagaggttgatacagttcctgcatga

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