Desulfomarina profundi: DGMP_23860
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Entry
DGMP_23860 CDS
T07650
Name
(GenBank) ligand-gated TonB-dependent outer membrane channel
KO
K16092
vitamin B12 transporter
Organism
dbk
Desulfomarina profundi
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dbk02000
]
DGMP_23860
Transporters [BR:
dbk02000
]
Other transporters
Pores ion channels [TC:
1
]
DGMP_23860
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
BCL61693
UniProt:
A0A8D5FHZ7
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Position
2586719..2588533
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AA seq
604 aa
AA seq
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MFFDDEMLVQTASRHSKPLTEVAENLTVVNGTAIKAMNAHTLYEVLARVPGLFVTYDGMD
FGSAASLTIHGASSEDLHRILVLLDGVRLNLSSNGNAILNGIPVSIIERLEIIKGPASSS
WGSAMGGVVNIITKAAWKKGHEGQVYGSYGTADSREVRMELSGKGTDAGYYLFAGNQHSD
GLTEDRFFNNTQVYVKGNATLKPGIRLVLSGGSFRPEWKNLNFPPADLMITAENRNGFFT
SGLDQSVGNLLSFHLSGGIIARNYTKKYNVLSGLIGTPDETLSKQTWREKSYNLNSRLVY
SDDIHTFVLGAEYAYNRLETSVDSTATAVVAWGTSSSSELPPATNKTVGVYLNDTLSWGR
FTLTPGVRYDYNSISNDFISPSLGLVYRATENNRLRITAARGFSTPYFSLLRDISQNQSS
NPNLKPEEIWSVQAGLETKSIPLLLCKTTLFFHNIDEIWEYSPNSGQIENGDNTKRSGFE
IEVESVPFHGLSVTGGFTYTMDDPDNTSSEDFYNTQITVNYTNPELFSLQLFGTALKWLK
GTTFEAEEDFIWDLNISRHFPSVSFASGFDLFMTVHNLFNGDQYWSSFYPNPERWVEAGL
KFRF
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgatgacgaaatgctggtgcagactgcgtcgcggcactccaaaccactgacc
gaggttgcggaaaacctcactgttgtcaatggaaccgccataaaggcaatgaatgcccat
accctgtatgaagtactcgctcgtgtacccggactctttgtcacatatgacgggatggat
tttggcagcgctgcttccctgaccattcacggtgcaagcagcgaagacctgcaccgaatc
ctggttttactggatggagtcaggttaaacctgtcttcaaatggcaatgcgattctgaac
ggtatcccggtatcaatcattgaaagacttgaaatcatcaaaggccccgcctcttcaagc
tggggttcagccatgggtggtgtcgtcaatattatcaccaaagcagcatggaaaaaaggt
catgaggggcaggtatacggttcctacggcactgcggacagccgtgaagtgagaatggaa
ctctccggcaagggaacggatgcgggctactatctttttgccggtaaccaacattcggac
ggactgacagaggacaggttctttaacaacactcaggtctatgtcaaggggaacgcgaca
ctcaaaccgggtatccggctggtgttgagtggaggcagtttccggcccgaatggaaaaat
ctcaattttcccccagcggatctcatgattacggcagaaaaccgaaatggttttttcacc
agtggtctggaccagtcagtgggaaatctgctcagttttcatttaagcggcgggatcatc
gccagaaattacacaaaaaagtacaacgtactttcggggctgattggtacgccggatgaa
acattgtcgaaacagacctggcgggaaaaaagttataacctgaacagtagactggtttac
agtgacgacattcataccttcgttctgggagccgaatatgcttataacagacttgaaacc
tctgtggattcaaccgccacagctgttgtcgcctggggaacatcatcgtccagtgagctt
ccaccggccaccaataaaactgttggtgtctatctaaacgataccctgtcctggggcagg
ttcaccctgactcctggagttcgctatgactataactccatcagtaatgatttcatcagt
cccagtctcggactggtttacagggcaaccgagaacaacaggctgcgaataactgcggcc
cgtggtttttccacaccctacttttccctgctgagagatatctcccagaatcaatcctct
aatccgaaccttaaaccggaagaaatatggtcagttcaagctggcctggaaaccaagtcc
attcctctcctgctctgtaaaacaacacttttttttcataatatcgacgagatctgggag
tacagccccaacagtggccaaattgaaaatggcgacaacactaaaaggtccggctttgaa
attgaagtggaatctgttcctttccacggcctgagtgtgacgggcggattcacctatacc
atggatgatcccgataacacatcaagtgaagatttttataacacccagataactgtgaac
tacaccaacccggaacttttttctctccagctgttcggcacagccttaaaatggctgaaa
ggaacgacttttgaggcggaagaagatttcatatgggatctgaatatcagcagacacttc
ccgtccgtttcatttgcttcaggctttgatctttttatgacagtgcacaacctctttaat
ggtgatcaatactggtcgagtttctatcccaatcctgaacgatgggttgaggccggattg
aaatttcgcttttaa
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