Desulfomarina profundi: DGMP_25890
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Entry
DGMP_25890 CDS
T07650
Name
(GenBank) pyruvate carboxylase subunit B
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
dbk
Desulfomarina profundi
Pathway
dbk00020
Citrate cycle (TCA cycle)
dbk00620
Pyruvate metabolism
dbk00720
Other carbon fixation pathways
dbk01100
Metabolic pathways
dbk01120
Microbial metabolism in diverse environments
dbk01200
Carbon metabolism
dbk01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DGMP_25890
00620 Pyruvate metabolism
DGMP_25890
09102 Energy metabolism
00720 Other carbon fixation pathways
DGMP_25890
Enzymes [BR:
dbk01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
DGMP_25890
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Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
Biotin_lipoyl
Biotin_lipoyl_2
HMGL-like
RnfC_N
HlyD_D23
GCV_H
Motif
Other DBs
NCBI-ProteinID:
BCL61896
UniProt:
A0A8D5JSA3
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All DBs
Position
complement(2805083..2806756)
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AA seq
557 aa
AA seq
DB search
MDPFLKLKKLRAAMPNTMFQTLCRGVNLFGYRPYPQNVIRFTVKEFAKYVDVWRTFDFMN
HVPNMIAVFEEVGKAGKLNEPCICFSTGPEHTDEFYVGKAGEIIDVTGEDIVLCIKNHGG
LGTPTRIGRLVDALKQKYPDIPIHYHGHNTDGNDVGRITEAVKNGATIIDAADFAFTGYY
GPPPILSVVQALNEFGHVPIGLDEEAVIETSEVIRDQRQYYEQFESQIKGFQPTVQIHKL
PGGAMGSSLEQASKGGFLDKMPDILHKELPRVQKELGNYWSVTPGSQILWTTAVSNVLGG
ERYGNPSGDLRNLLLGKYGPFPFYQPEEWIYEKVLGDDWKKVLEEEGGVEDIENIDLAHE
RYALAEHLGVEPTDQQLILYLQHPNDAVEFFKFEEKYGRVYVLPPAIFFHRGGFDVGDKL
AFRDHQGKEHMIEVGPSPVTDTGETTVYLAVDHHQHIFEFKPDVATSEKGEPVLTKEEIL
DLAKLGDMRSPFAGNIVEISVDEGQEVLMGDRIAIMEAMKMQTPILCEMSGIVTSIFARK
GDALKPGDRIIKIDQDE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtggacccttttctgaaactgaaaaaactccgggcggcaatgccgaataccatgtttcag
accctttgcaggggcgtgaatctctttggttatcgaccctatccacagaacgtgatccgt
tttacggtaaaagaatttgccaaatatgtggatgtgtggcgaacttttgactttatgaat
catgtgccgaatatgatagccgtgttcgaggaggtgggcaaggcgggcaagttgaatgaa
ccgtgtatttgcttttccacggggccggagcataccgatgagttttatgtgggcaaggcg
ggagaaataattgatgtgacgggggaagacatcgtcctctgtataaaaaatcatggcggt
ctcggcactcccacgaggatcggacggctggtggatgcgctcaaacagaaatatcctgac
attccaattcattatcatgggcacaacactgatggtaacgacgtgggcaggatcactgag
gcagtgaaaaacggtgcaaccattattgatgcggccgatttcgcctttaccggttactac
ggtcctccgccaatcctcagtgtggttcaggccctgaacgaattcggtcatgtgcccatc
gggcttgacgaggaagcggtgattgaaacatcggaagttattcgtgatcagcgtcagtat
tatgagcagttcgagtctcagatcaaggggtttcagcccacggtccagattcataaactg
ccgggcggtgccatgggatcgagcctggagcaggcgtcaaaaggcggttttctcgacaag
atgccggacatcctccataaggagctgcccagggtgcagaaagagctgggcaactactgg
tcagtaacaccgggatcacagattctctggacgacggcagtttccaatgtgcttggcggg
gagcgctacggcaacccgtcaggagacctccgcaacctgcttctcgggaaatatggcccg
tttcccttttaccagccggaggagtggatttacgaaaaagtactgggggacgattggaaa
aaagtccttgaggaagagggcggtgtggaagacattgaaaacatagatcttgcccatgag
cggtatgctctggccgaacatctaggggttgaacccaccgatcaacagcttattctctat
cttcaacatcccaatgatgcggtggaattttttaaatttgaagaaaaatatggcagggtt
tatgtactgccgcctgcgatttttttccaccggggagggttcgatgtcggagacaaactg
gcctttcgggatcaccagggcaaggagcatatgatcgaggttggtccctctcctgttaca
gatacaggggaaaccacagtctatctggctgttgaccatcatcagcatatttttgagttt
aaacccgatgttgcaacttcagaaaaaggtgaaccggttctcaccaaggaagagatcctt
gatcttgccaaactgggggatatgcgttctccgtttgccggaaatattgtggaaatatcg
gtggatgaaggccaggaagtgctgatgggagatcgtatcgccattatggaggccatgaag
atgcagacgccgattctgtgtgaaatgagtggaatagtaacatcaatttttgccagaaag
ggcgatgccttgaagccgggtgaccggattataaaaattgaccaggatgagtaa
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