Desulfomarina profundi: DGMP_25930
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Entry
DGMP_25930 CDS
T07650
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase (glutamine-hydrolyzing)
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
dbk
Desulfomarina profundi
Pathway
dbk00220
Arginine biosynthesis
dbk00240
Pyrimidine metabolism
dbk00250
Alanine, aspartate and glutamate metabolism
dbk01100
Metabolic pathways
dbk01110
Biosynthesis of secondary metabolites
dbk01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DGMP_25930 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DGMP_25930 (carB)
00220 Arginine biosynthesis
DGMP_25930 (carB)
Enzymes [BR:
dbk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DGMP_25930 (carB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
Dala_Dala_lig_C
RimK
GARS_A
ATP-grasp_5
ATP-grasp_4
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
BCL61900
UniProt:
A0A8D5FJD8
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All DBs
Position
2810010..2813222
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AA seq
1070 aa
AA seq
DB search
MPKRTDIKKILIIGSGPIIISQACEFDYSGAQAVKALKEEGFEVILINSNPATIMTDPEL
ADATYIEPITPEFVARVIRKERPDALLPTLGGQTALNTAIKVAETGVLDEYNVELLAANI
EVIRKAEGREEFRDAMRKINLKVPESAIVQTIEDAMAAGDEIGFPIIVRPSFTLGGTGGG
VAYNRQELRELCTSGLDLSMTTEIMLERSLLGWKEYELEVMRDRNDNVVIICSIENVDAM
GVHTGDSITVAPAQTLSDREYQNMRDAAIAIIREIGVETGGSNVQFAVNPDNGELMVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELRNDITRVTCAAFEPTIDYCVVKIPR
WTFEKFPEADDILTTAMKSVGETMSIGRTFKEAFQKAMRSLETGRFGFGGDGKQVLTDLE
QEDLEKGLRQPSSKRIAEIYEALKRGMDINELYNHTKIDPWFLHNFKQIVETEKEILEKG
FQGLDRDFLRFCKERGFSDQQLAFLTGTSENDIRELRKKLEITPVYKLVDTCGAEFESYT
PYFYSTYEQENEAMATNGKKIVILGGGPNRIGQGIEFDYCCVHASFALREIGVESIMVNS
NPETVSTDYDTSDKLYFEPLTREDVLNIIEQEKPDGVIVQFGGQTPLNLAVPLEQAGVKV
IGTQPDAIDRAEDRKRFQQFLQKLGLRQPENDTVFTLEEAISAANSIGYPVVVRPSYVLG
GRDMRIVYNDPGIKDFMQAMGGERLEHPVLIDKFLQDAIEVDVDAISDGTDTIIGGIMEH
VEEAGIHSGDSSCVLPPHTLSAPLVEEIKQASRAMAVELGVIGLMNVQFAVKDEQLYVLE
VNPRASRTVPFVSKATGVPLAKLATKVMLGATLKELGITEEVEIDHWAVKEAVFPFDRFE
NVDTLLGPEMKSTGEVMGIDDNLGLAIVKSHLAVGATLPKSGNVFISVRDGDKNNIVSVA
KTLLDLNFTILATSGTAAFLRDKGIKCTHINKISQGRPHILDKIRDNEISWIVNTSLGKR
TTEDSYTIRRAALDFHIPYTTTTSGAKALVKGMGELVKNELGVQPVQYFT
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgaacagacataaagaaaattctcattatcggctccggaccgatcattatc
agccaggcctgtgaatttgattactccggcgcccaggcggtcaaggccctgaaggaagaa
gggttcgaagtcattctgattaactccaatccggccaccatcatgaccgacccggagctg
gcagacgccacttatatcgaaccgatcacccccgagttcgttgccagggtcatcagaaaa
gaacgccctgacgccctgctccccaccctggggggacagacagctctgaatacggcaatc
aaggtcgcggagacaggagtgctggacgagtacaatgtggaactgctggccgccaatatc
gaagtaatcagaaaggcggagggcagggaagaattcagggacgccatgagaaaaatcaac
ctgaaagttcccgaatccgccattgtccagaccattgaagatgccatggcagccggagat
gaaatcggttttccgattatcgtccgtcccagcttcacccttgggggaacaggcggcgga
gtcgcttacaaccgtcaggaattgagagaactctgcacttccggacttgatctttccatg
acaacggagatcatgctggaaagaagcctgctcggctggaaggagtatgagcttgaggtc
atgcgggacagaaacgacaatgtagtcatcatctgttccattgaaaacgttgacgccatg
ggagttcacaccggtgacagtatcacggttgccccggcccagaccctcagcgaccgggaa
taccagaacatgcgggacgctgctattgccattatccgggaaatcggggtagaaacgggc
ggctcaaacgttcagtttgccgtcaatcccgacaatggagaactgatggtcatcgagatg
aatccgcgagtctcccggagttcggctctggcctccaaagccactggctttcccattgcc
aaaatcgcagccaaacttgctgtgggttataccctggacgaactgcgcaacgatattacc
agggtaacctgcgccgcttttgaaccgacaattgattactgcgtagtgaaaattccccgc
tggactttcgaaaaatttccggaagctgacgatatactgacaacagccatgaaatcggtg
ggtgaaaccatgtctatcggcagaaccttcaaagaggctttccagaaggccatgcgttcc
ctcgaaacagggcgtttcggttttggcggtgacggaaagcaggtcctgaccgatcttgag
caggaggacctggaaaagggcctcagacagccaagctccaaacggattgctgaaatctac
gaagcactcaaacgcggcatggatatcaatgaactgtacaaccatacaaagatcgacccc
tggtttctccataatttcaaacagattgtggaaacagaaaaagaaatcctggaaaaaggc
ttccagggactggacagggattttctccggttctgtaaggagcgcggtttttccgaccag
cagctggcctttctcaccggcaccagtgaaaatgatatccgcgagctgcgaaagaaactg
gaaatcactcccgtatataaactcgtggacacatgcggagcggaatttgaatcttacacc
ccctatttttattccacatacgaacaggaaaacgaggccatggccaccaatgggaaaaaa
atcgtcatcctgggtggcggtcccaaccgtatcggccagggcatcgaatttgactactgt
tgtgttcacgcctcttttgccttaagagaaatcggagtggaatccattatggtcaattcc
aacccggaaaccgtctccactgactatgatacttcggacaaactctattttgagcctctt
acccgtgaggatgtgctgaatattatagaacaggaaaaaccggacggggtcattgttcag
ttcggcgggcagacccccctgaacctggcggtacccctggagcaggccggagtaaaagtg
atcggcacccagccggatgccatagacagggcggaagacaggaaacggttccagcagttt
ctgcagaaacttggcctgcgccagccggaaaatgataccgtcttcacccttgaagaagcc
atcagcgccgcgaacagtatcggctatcccgtggttgtccgcccatcctacgtccttggc
ggccgtgacatgcgaatcgtctacaacgaccctggtattaaggactttatgcaggccatg
ggcggtgaacgtcttgagcaccctgttctcatagataaatttctccaggacgccatcgaa
gtggatgtggatgccatcagtgacggcacagacaccattatcggcggtatcatggaacat
gtggaagaggccggcattcattccggcgactcttcctgtgtgcttcccccccataccctg
tccgctcctctcgtagaagaaatcaagcaggccagcagggccatggccgtggaactgggt
gttatcggtctcatgaatgtacagtttgccgtgaaagacgagcagctctatgtccttgag
gttaatccccgtgcctcccgtactgtccccttcgtcagcaaggcaactggtgtccccctg
gccaaactggcaaccaaggttatgcttggtgccacactgaaggaactgggaataacagaa
gaggttgaaatcgaccactgggccgtaaaggaggccgtcttccccttcgaccgttttgaa
aatgtcgacaccctcctgggaccggagatgaaatccaccggtgaagtcatgggtatcgac
gacaatctcggcctggccatcgtcaaatcccacctggccgttggcgccactctgccaaaa
tcaggcaacgtgtttatcagtgtacgagacggtgacaagaacaatatcgtctcggtggca
aaaaccctgcttgacctgaatttcaccatactggccaccagtggtaccgcggcgttcctg
cgcgataagggaatcaaatgtacccatatcaacaaaatctcccagggccgtccccatatt
cttgataaaatccgtgacaacgaaatttcatggattgtcaatacatcccttggaaaacga
acaacagaggattcctacaccatcaggagggcagccctcgactttcatatcccctacacc
acaacgacaagcggcgcaaaagccctggtcaagggaatgggagaactcgttaaaaatgag
ctcggtgtgcagccggtccagtactttacatga
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