Desulfomarina profundi: DGMP_27300
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Entry
DGMP_27300 CDS
T07650
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dbk
Desulfomarina profundi
Pathway
dbk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DGMP_27300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dbk02000
]
DGMP_27300
Transporters [BR:
dbk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DGMP_27300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
FAKV_Clamp
Motif
Other DBs
NCBI-ProteinID:
BCL62037
UniProt:
A0A8D5FI44
LinkDB
All DBs
Position
complement(2950437..2952035)
Genome browser
AA seq
532 aa
AA seq
DB search
MNICKKLLLGSAAVALLALTGPVHAKTPANMLVIANRIDDITTLDPAQSFEFAGSDLIRN
VYGKLVNFDPADLSKGYQPDLAESWTVSEDGRTITFKMRPGVKFQSGNPVTARDAVFSLQ
RAVKLNKTPAFILTQFGFSKENADDTIKLIDDMTFSITTDEKYATSFVLNCLTATIGGIV
DSKTVMAHEKDGDMGNGWLKTHTAGSGAYTLVNWKPNESYTLKANPNFYIGAPKLSRVIV
RHIQESSTQRLLLEKGDIDVARNLNPQDVAGISGNPDLAVDSDLRGRIMYISMNQKDPNL
AKPKVVKALKYLIDYKGMQDSFLKGQYTIHQAFLPRTYLGEIDDKPYSFNVEKAKALLKE
AGLADGFSLKINVREAQERIEISQSLQNTFAQAGIKVTLEVGTGKQTLAKYRAREHQIYV
GAWGPDYPDPNTNAATFAYNPDNSDEAKATGLLAWRNAWYIPEMSKATKEAVKEGDREKR
AAMYRAIQREHQERAPFAIMFQKIEQTGRRANVKGLNLGGAITAVSYWPVTK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaatatctgcaaaaaactgctcttaggttcggcggcggtggcgcttcttgcgcttacc
ggtccagtacacgcgaaaacaccagcgaatatgctggtgattgcaaacaggatcgatgat
ataacaacccttgatccggcccagtcatttgagttcgccggttcagaccttatccgtaat
gtttatggtaagcttgttaattttgatccggcggatctcagtaaagggtatcagcccgat
ctggctgaaagctggacggtttcagaagacggcagaaccatcaccttcaaaatgcgtccc
ggggtcaagtttcagtccgggaatcctgtaacggccagggatgcggttttttctctgcag
cgggcagttaagttgaacaagacacccgcttttattctgacccagtttggattttccaag
gaaaatgcggatgatactatcaagttgattgatgatatgaccttttccatcaccacggac
gagaagtatgcaacttcttttgttctcaactgtctgacggcaaccatcggcggcattgtt
gattccaaaaccgttatggcccatgaaaaagatggtgacatgggaaatggctggctgaag
acccataccgccggttccggagcatatactctggtcaactggaaacctaatgaatcctac
acgctgaaggccaatcccaatttttatatcggagcacccaagctcagccgggtcattgtc
cgtcatattcaggaatcttccacccagcgtctgctgctggaaaaaggtgatatcgatgtt
gcccgaaatctcaatccccaggatgtggccggtatcagcggaaatccagatctcgctgtg
gacagtgatctgcgtggtcgtatcatgtatatttccatgaatcagaaggatccgaacctt
gccaaaccgaaggtcgtcaaggccctgaaataccttatcgattacaagggaatgcaggat
tcttttctgaagggacagtacactattcaccaggcgtttctgccacggacctaccttggt
gagattgatgataagccatatagttttaatgtagaaaaggccaaagcgctgctgaaagag
gcgggactggccgatggtttttctctgaaaataaatgtgcgtgaggcccaggaacgtatt
gaaatatcccagtccctgcagaatacttttgcccaggcaggtatcaaggttaccctggaa
gtcggtaccggcaaacagaccctggcaaaatatcgtgcccgtgaacaccagatctacgtg
ggtgcatggggacctgattatcccgatccgaacaccaacgccgcaacatttgcctacaat
ccggataattccgatgaggccaaggcaaccggtcttcttgcctggcgaaatgcctggtat
atccctgagatgtccaaagccaccaaggaagcggttaaggaaggggatcgtgaaaagcgt
gcggccatgtaccgtgccattcagcgggaacatcaggaacgtgccccgtttgccatcatg
tttcagaagattgaacaaaccggcaggcgtgcgaacgtaaaaggtctgaatctcggtggc
gcaattaccgccgtatcctattggccggtaacaaaataa
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