KEGG   Desulfomarina profundi: DGMP_28950
Entry
DGMP_28950        CDS       T07650                                 
Symbol
hup
Name
(GenBank) DNA-binding protein HU
  KO
K05788  integration host factor subunit beta
Organism
dbk  Desulfomarina profundi
Brite
KEGG Orthology (KO) [BR:dbk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dbk03032]
    DGMP_28950 (hup)
   03036 Chromosome and associated proteins [BR:dbk03036]
    DGMP_28950 (hup)
   03400 DNA repair and recombination proteins [BR:dbk03400]
    DGMP_28950 (hup)
DNA replication proteins [BR:dbk03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DGMP_28950 (hup)
Chromosome and associated proteins [BR:dbk03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    DGMP_28950 (hup)
DNA repair and recombination proteins [BR:dbk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      DGMP_28950 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: BCL62202
UniProt: A0A8D5FIE4
LinkDB
Position
complement(3139130..3139414)
AA seq 94 aa
MLKKELVDRVSNELAMQKQDIGLAVDILLETMAGALEDNRRIELRGYGSFSVRSRKPRST
KNPRTGKIMNIPERKTLHFTMSKSLKEALISETE
NT seq 285 nt   +upstreamnt  +downstreamnt
atgttaaaaaaagaacttgtagacagggtaagtaacgaacttgccatgcagaaacaggat
atagggttggcggtggatatcttactggaaacaatggctggggccctggaggataacagg
agaatagaactgcgcggatatggcagcttttcggtgagaagcagaaagcccaggtcaacc
aaaaacccgcggaccgggaaaatcatgaacattccggagcggaaaacgctccattttacc
atgagcaaatccctgaaagaggccctgatcagcgaaacggagtaa

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