Desulfomarina profundi: DGMP_28950
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Entry
DGMP_28950 CDS
T07650
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K05788
integration host factor subunit beta
Organism
dbk
Desulfomarina profundi
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dbk03032
]
DGMP_28950 (hup)
03036 Chromosome and associated proteins [BR:
dbk03036
]
DGMP_28950 (hup)
03400 DNA repair and recombination proteins [BR:
dbk03400
]
DGMP_28950 (hup)
DNA replication proteins [BR:
dbk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DGMP_28950 (hup)
Chromosome and associated proteins [BR:
dbk03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DGMP_28950 (hup)
DNA repair and recombination proteins [BR:
dbk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DGMP_28950 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
BCL62202
UniProt:
A0A8D5FIE4
LinkDB
All DBs
Position
complement(3139130..3139414)
Genome browser
AA seq
94 aa
AA seq
DB search
MLKKELVDRVSNELAMQKQDIGLAVDILLETMAGALEDNRRIELRGYGSFSVRSRKPRST
KNPRTGKIMNIPERKTLHFTMSKSLKEALISETE
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaaaagaacttgtagacagggtaagtaacgaacttgccatgcagaaacaggat
atagggttggcggtggatatcttactggaaacaatggctggggccctggaggataacagg
agaatagaactgcgcggatatggcagcttttcggtgagaagcagaaagcccaggtcaacc
aaaaacccgcggaccgggaaaatcatgaacattccggagcggaaaacgctccattttacc
atgagcaaatccctgaaagaggccctgatcagcgaaacggagtaa
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integrated database retrieval system