Desulfomarina profundi: DGMP_28960
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Entry
DGMP_28960 CDS
T07650
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
dbk
Desulfomarina profundi
Pathway
dbk03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
DGMP_28960 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
dbk03011
]
DGMP_28960 (rpsA)
Ribosome [BR:
dbk03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
DGMP_28960 (rpsA)
Bacteria
DGMP_28960 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
S1_2
Motif
Other DBs
NCBI-ProteinID:
BCL62203
UniProt:
A0A8D5FIX1
LinkDB
All DBs
Position
complement(3139547..3141277)
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AA seq
576 aa
AA seq
DB search
MTEELKQSTPGGNEDLSFAELFEMEENNKVVAVGDVAMGTIIGAVDDYFLVDVGDKAESY
IAKSEFRQEDETEIKVGDVFEVFVERRKEEGGLLLSREKAIAIKVWEKIAEIQEADGIIE
GRIESRVKGGMSVDIGVPAFLPYSQIDLRPVKDLDALIGQVFEFKILKFNRKRNNVVISR
RAILEEERQKLREQMRSKLEEGQIIKGAITNITDYGLFIDMGGMDGLCHITDLSWGRVSH
PAKLYKVGEELEVKVLKYDKEKDRVSLGVKQLRDDPWETVVEKYPVGEKTTGKVVSITDY
GVFVELEEGVEGLIHVSEMTWSKKPRHPSKMVAVGDELEIMVLNIETETKRISLGMKQLQ
PNPWDLVTENYPVGSIIEGKIKNITDFGVFIGIEEGIDGLIHVSDLSWTERIKHPSEKYT
KGETIQAVVLKIDKENERFSLGIKQLVPDPWQAAYNNYPSGTVVEGEITNVTDFGVFVKL
EEGIEGLVHVSEISKDKVKTPIGMYQVGDTLKAIVINVSAKDRKIGLSVKTLEGEDEEAA
VEKFKKAEKAPEKTAPSTFGDLLKAAAEGGDSSDEG
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaattgaaacaatcaaccccgggcggtaatgaagacctgagctttgcagag
ctctttgaaatggaagaaaataacaaagtggtcgctgttggtgatgtggccatgggcact
ataatcggtgccgttgatgattattttcttgttgatgtgggcgataaggctgaaagctat
atcgctaaatccgagtttcgccaggaagatgagaccgaaataaaagtcggtgatgttttt
gaggtgtttgtagaacgccgtaaagaggaaggcggactgcttctgtcacgggagaaggcc
attgcgatcaaggtctgggagaagattgccgagatccaggaagccgatggtattatagaa
ggtcgtattgaaagtcgtgtgaaaggaggaatgtccgtggatatcggagttcccgccttc
cttccctattctcagatcgatctccgtcccgtcaaggaccttgacgctctgattggacag
gtttttgagttcaagattctgaaattcaatcgtaagcggaacaatgttgttatttcccgc
cgggccattcttgaagaagaacgtcagaagttgcgtgaacaaatgcgttccaagctggaa
gaaggccagatcatcaagggtgccatcaccaatatcaccgattacggtctctttatcgat
atgggtggaatggacggtctctgccatatcaccgatctttcctggggtcgggtttcccat
cctgccaagctgtacaaggttggcgaggaactggaagtaaaggtactgaaatacgacaag
gaaaaagatcgtgtttctctcggcgtcaagcagcttcgcgatgatccgtgggagaccgtg
gtggaaaaatatcccgttggcgagaagaccactggaaaggttgtgtccataacggattac
ggtgtatttgtagaacttgaagagggagttgagggtcttattcatgtttctgaaatgacc
tggtcgaagaaaccgcgccatccttccaagatggttgccgtgggcgatgagcttgagata
atggtgctcaatatcgaaacggaaaccaagcggatttctcttggtatgaagcagttgcag
cccaatccgtgggatctcgtcaccgagaactaccctgttggttcaattattgaaggaaaa
attaaaaatattaccgacttcggtgtctttatcggcattgaggaaggtattgacgggctt
atccatgtttctgatctttcctggaccgagcgaatcaagcatccttccgagaagtacacc
aagggtgagacaattcaggcggttgttctgaaaatcgacaaggagaacgaacgattctcc
ctcggtatcaagcaacttgtaccggatccatggcaggctgcttacaataactatccctcc
ggaaccgtggttgagggagaaatcaccaatgtcaccgattttggtgttttcgtgaaactt
gaagaaggtattgaaggtcttgttcatgtatctgaaatcagcaaggataaggtaaagaca
cccatcggcatgtatcaggtcggtgataccctgaaggccatcgttatcaatgtatcagcg
aaagaccgcaaaatcgggctctccgtgaagacactggaaggtgaagatgaagaggctgct
gtcgagaaattcaagaaggcggagaaagcacctgaaaaaacggcaccttcaacctttggt
gatctgttgaaagcggctgctgaaggtggagattcttcagacgagggttaa
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