Desulfomarina profundi: DGMP_29340
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Entry
DGMP_29340 CDS
T07650
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K06714
arginine utilization regulatory protein
Organism
dbk
Desulfomarina profundi
Brite
KEGG Orthology (KO) [BR:
dbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dbk03000
]
DGMP_29340
Transcription factors [BR:
dbk03000
]
Prokaryotic type
Helix-turn-helix
Other families
DGMP_29340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
PAS_9
PAS
Mg_chelatase
AAA
AAA_7
bpMoxR
AAA_22
PAS_8
HTH_30
PAS_4
Motif
Other DBs
NCBI-ProteinID:
BCL62241
UniProt:
A0A8D5JSL3
LinkDB
All DBs
Position
complement(3188660..3190150)
Genome browser
AA seq
496 aa
AA seq
DB search
MEFSYGDMNGDSFDIREIDFISVMDSMDEGVIITDNRGVIQYYNETQAKIDGLDCQFVVG
KKVTDIYQLSGDTSLIMLCIRLGKPIRNRTFFYKTKFGKIANTIHSIFPVYRGAVVYGTI
CFVKDYKILRNTTPVVSIPEVKPTRENGTSYTFADIIGHNHELVRSVNTSRVAADSVSPI
MLIGETGTGKELFAQSIHNQSARSRKPYVAVNCAAIPENLLEGLLFGTTRGAFTGAMDKP
GLLEQANGSTLFLDELLSMPLSLQAKMLRVLQEKKVRRIGSSQEINLNVKIITSVNKAPR
DAIQDGELRIDLFYRVGVVMVKIPPLRDRSDDLEELINHFILTLNKALGTNVRSISSEVM
NLFRGYNWPGNIRELEHLLEGALNIIGYDEELSMKHFSAVFESMENMNPPGVDTAAAPVA
SRRKSRFPEQVPVVTPGSGKTLVEYQAEQEKKAVSEVLLATEGNITRAAVLLGISRQLLH
YKMKKHGLKRSAFTVE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggaattctcatacggtgacatgaatggagacagctttgatatccgtgaaatcgatttt
atttccgtaatggacagcatggatgaaggtgtcattataacagataatcgtggagtcatt
cagtactataatgaaacccaggcaaagatcgatggtctggactgtcagtttgttgtcggt
aagaaagtaacggatatttatcagttgagcggggacacaagccttatcatgctctgcatc
cgcctgggaaagcctattcgcaaccggacgtttttttataagacaaaattcggtaaaatt
gccaacaccatccattccatttttcctgtttaccggggtgccgtggtttacggtaccatc
tgttttgtaaaagattacaaaattctcaggaatacaaccccggtcgtctccatcccggaa
gtcaaaccaaccagggaaaacgggacatcttatacttttgccgatattatcggccataat
catgagctggtgcggtcggttaatacgtccagagtcgcagccgattcggtttctccgatc
atgcttattggggaaacaggaacgggaaaggagttgtttgcccagtcgattcataaccag
agtgcgcggagcaggaaaccgtatgttgccgtaaactgcgcggccattcctgaaaatctg
ctggaaggcctgctctttggcacaaccagaggggcctttaccggggccatggataaaccg
gggctgctggaacaggccaatggttccaccctttttctggatgaactgctttccatgccg
ctttctctgcaggccaaaatgttgcgggttctccaggaaaaaaaggttcgtcgcattggt
tcctctcaggaaatcaatcttaatgtgaagatcatcacttcggttaacaaggcaccccgg
gatgccattcaggacggagagctgcgtattgatctgttctacagggtgggagttgtcatg
gtgaaaattccgcccctgcgggatcgttctgatgacctggaggagctgatcaaccacttt
atcctgacccttaataaagccctgggaaccaatgtccgctccatctccagtgaggttatg
aatcttttcaggggatataactggcccggtaatatcagggaactggagcatctgctggag
ggggcactcaatattatcggttatgatgaagagctttcaatgaagcatttttccgcagtt
tttgaatccatggaaaacatgaatccgccaggtgttgatactgctgctgcgcctgttgcc
tcccgcaggaaaagccggttcccggaacaggttcctgttgtgactcccggttcgggaaaa
actctggtcgaataccaggcagagcaggaaaaaaaggccgtgtccgaggttctactggca
accgaaggaaacataacccgggccgcggtacttctggggatttccagacagcttctccat
tataagatgaaaaagcatggtttgaagagatctgcttttacagtggaataa
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